| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0704 |
|---|
| Symbol | |
|---|
| ID | 6109614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 774423 |
|---|
| End bp | 774977 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641620461 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_001747578 |
|---|
| Protein GI | 170719890 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.94046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000436359 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG AACAGCTGAA TGAGAAAGAC CTTAACGCCG AAGAGGCTGG TGCAGTGGAT
AACGGCGCCC GCGTTCAAGA GCTCGAGGAG CAGCTGGCCG CCGCCAAGGA TCAGTCCCTG
CGTGCCGTTG CCGATCTGCA GAACGTGCGT CGCCGCGCCG AGCAGGATGT CGAGAAGGCG
CACAAGTTCG CCCTGGAAAA GTTTGCCGGC GACCTGTTGC CGGTGATCGA CAGCCTGGAG
CTGGCTCTGG CGCACTCCAG CGCTGAAGAT GAGCAGGTCA AGAAGATCCG TGAAGGCGTC
GAACTGACCC TCAAGATGTT CCAGGACACC CTCAAGCGTT ACAACCTCGA AGCCATCGAC
CCGCACGGCC AGCCGTTCAA CGCCGAGCAC CATCAGGCCA TGGCCATGCA GGAAAGCGCC
GAGGTAGAGC CTAACAGCGT GCTGAACGTG TTCCAGAAGG GCTACCTGCT CAATGGCCGC
CTGCTGCGCC CTGCCATGGT GGTGGTCAGC AAGGCGCCGA GCGCGCCGCA GCCTTCGATC
GATGAAAAGG CTTGA
|
|---|
| Protein sequence | MADEQLNEKD LNAEEAGAVD NGARVQELEE QLAAAKDQSL RAVADLQNVR RRAEQDVEKA
HKFALEKFAG DLLPVIDSLE LALAHSSAED EQVKKIREGV ELTLKMFQDT LKRYNLEAID
PHGQPFNAEH HQAMAMQESA EVEPNSVLNV FQKGYLLNGR LLRPAMVVVS KAPSAPQPSI
DEKA
|
|---|
| |