| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0642 |
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| Symbol | |
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| ID | 6109551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 700258 |
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| End bp | 700887 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620399 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001747516 |
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| Protein GI | 170719828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.498464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC CACCCCGTTC CAAGCCGCGC CACCCCAAGG CGCGGCCCGC CGGCCCAAGG
CGCCAGCCCA AGGCGCCCCC GGCCGAGCCG CGCCTGATTC TGTTCAACAA GCCGTTCGAT
GTGCTTACCC AGTTCAGCGA CAGCGATGGC CGTGCCACGC TCAAGGATTA CATTGATATT
CCTAGCATTT ACCCGGCCGG GCGGCTGGAC CGTGACAGTG AAGGGTTGCT GTTGCTGACC
AACGACGGCG GTTTGCAGGC GCGCATCGCT GACCCCAGGC ACAAGCTGGC CAAGACGTAC
TGGGTGCAGG TGGAAGGCGA ACCGAACGAT GAGCAGCTAA AGCGGTTGCG CGAAGGCGTG
GAGCTCAATG ACGGGCCGAC CTTGCCTGCC GAAGCACGGC GCCTCGATGA GCCTGAGCTG
TGGCCGCGCA ACCCGCCGGT ACGCTTTCGC AAGAGCGTGC CGACCAGTTG GCTGGAGCTG
GTGATTCGAG AGGGGCGTAA CCGCCAGGTG CGGCGCATGA CAGCGGCGGT GGGCTTGCCG
ACTCTGCGCC TGGTGCGTGT GCGGATCGGT GATTGGGCGC TGGATGGGCT GGAGCAGGGC
TGTTGGCGCG AGGTGCCGGC CAAGCTGTAG
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| Protein sequence | MPLPPRSKPR HPKARPAGPR RQPKAPPAEP RLILFNKPFD VLTQFSDSDG RATLKDYIDI
PSIYPAGRLD RDSEGLLLLT NDGGLQARIA DPRHKLAKTY WVQVEGEPND EQLKRLREGV
ELNDGPTLPA EARRLDEPEL WPRNPPVRFR KSVPTSWLEL VIREGRNRQV RRMTAAVGLP
TLRLVRVRIG DWALDGLEQG CWREVPAKL
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