| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0625 |
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| Symbol | holA |
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| ID | 6109534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 680933 |
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| End bp | 681988 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620382 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001747499 |
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| Protein GI | 170719811 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCGCC TGTTTCCGAT GAAGCTCGCC CCCGCCCAAC TCAACAAGCA CCTGCTAGGC
GCTCTGGCCC CGGTCTATGT GGTCAGTGGC GACGATCCGC TGCTGTGCCA GGAAGCCGCC
GACGCCATAC GCAATGCTGC GCGTCAGCAG GGCTTTGACG AGCGCCAGGT GTTCAGCGCC
GACGCCAGTT TCGACTGGGG AACCCTGCTG CAGGCGGGCG CCAGCCTGTC CCTGTTCGCC
CAACGCCGGC TGCTGGAACT GCGCCTGCCC TCGGGCAAGC CTGGTGACAA AGGCGCTGCA
GCGTTGATGG AATACTGCGC CAACCCTGCC GAGGACACCC TGCTGCTGGT CAGCCTGCCC
AAACTCGATG GCAGTGCGCA GAAGACCAAA TGGGGCAAGG CCCTGATCGA GGGAAGCCAT
TGCCAGTTCA TCCAGATCTG GCCGGTGGAT GCCCAGCAGT TGCCGCAATG GATCAGCCAG
CGTTTGGCAC AGGCCGGTCT TTCGGCCCAG CGTGATGCGG TCGACCTCAT TGCCGCACGT
GTCGAAGGCA ACCTGCTGGC TGCTGCTCAG GAAATCGAAA AGCTCAAACT GCTCGCCGAC
GGCAGCCAGG TCACCGTCGA GACTGTGCAG GCGGCAGTTG CCGACAGCGC GCGCTTCGAT
GTCTTCGGCC TGGTCGATGC CATTCTCAAT GGCGAAGCTG TGCATGCCCT ACGGATGCTC
GAAGGCCTGC GCGGCGAAGG AGTAGAGCCG CCTGTGATTC TGTGGGCCCT GGCGCGCGAA
CTGCGTCTGC TGGCAGGGCT TTCGCAGCAG TTCAGCCAGG GCGTGCCCTT GGACAAGGCC
TTCAGCCAGG CCCGTCCACC GGTATGGGAC AAGCGCAGGC CGCTGGTCAG CAAAGCCCTG
CAGCGCCTGT CGGCGCAACG CTGGGCGCAG CTGCTGCAGG ATGCCCAGCG CATCGATGCG
CAGATCAAGG GGCAAGCCGA GGGTTCTCCA TGGACCGGGC TGTCACGCTT GTCATTGCTC
ATGGCCGGGC AGCGGTTGGC TCTACCGCCT GAGTGA
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| Protein sequence | MPRLFPMKLA PAQLNKHLLG ALAPVYVVSG DDPLLCQEAA DAIRNAARQQ GFDERQVFSA
DASFDWGTLL QAGASLSLFA QRRLLELRLP SGKPGDKGAA ALMEYCANPA EDTLLLVSLP
KLDGSAQKTK WGKALIEGSH CQFIQIWPVD AQQLPQWISQ RLAQAGLSAQ RDAVDLIAAR
VEGNLLAAAQ EIEKLKLLAD GSQVTVETVQ AAVADSARFD VFGLVDAILN GEAVHALRML
EGLRGEGVEP PVILWALARE LRLLAGLSQQ FSQGVPLDKA FSQARPPVWD KRRPLVSKAL
QRLSAQRWAQ LLQDAQRIDA QIKGQAEGSP WTGLSRLSLL MAGQRLALPP E
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