| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0618 |
|---|
| Symbol | |
|---|
| ID | 6109527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 674961 |
|---|
| End bp | 676121 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641620375 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001747492 |
|---|
| Protein GI | 170719804 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.143344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA CCAACCTTGC CAAACGACTT TGCCTGCCCG TACTGCTGAT GATCACGCCT
GCTGCCTTTG CGGCAGAGCA GATGATGCCG GCACCACCGC AACTGGCAGC CAAGTCCTAC
GTACTCATGG ACGCGTCCAG CGGCAATGTG CTGGTCGAGA ACAACGGTGA CGAGCGCCTG
CCGCCGGCCA GCCTGACCAA GCTGATGACC GCCTACATCG CCACCCTGGA CATCCGCCGT
GGCCAGATCG GCGAGAACGA TCCGGTCACC GTCAGCGAGA ATGCCTGGCG TACCGGTGGT
TCGCGCATGT TCATCAAGGT CGGTAGCCAG GTCACCGTCA GTGACCTGCT GCATGGCATC
ATCATCCAGT CGGGCAACGA TGCTTCGGTC GCCTTGGCCG AGCACATCGC TGGCAGCGAA
GATGCCTTTG CCGACATGAT GAACAAGACT GCCGCCGACC TGGGCATGTC CAACAGCCAC
TTCATGAACC CGACCGGTCT GCCGCACCCG GACCACTACT CCTCGGCCCA TGACATGGCT
ACCCTGGCTC GCGCGATCAT CAACGTCGAC CCGGCCCACT ACGCGATCTA CTCGCAGAAA
GAGTTCTTCT GGAACAACAT CAAGCAGCCA AACCGCAACC TGCTGCTGTG GCGTGACAAG
ACGGTCGATG GCCTGAAGAC CGGCCACACC GAAGAAGCCG GCTACTGCAT GGTGGCCTCG
GCTGTACGCG ACGGCCAACG CTTGATCGCG GTGGTGTTCG GCACCAATAG CGAGCAGTCC
CGTGCTGCCG AAACCCAGAA GCTGCTGACC TATGGCTTCC GCTTCTTCGA AACCCAGACC
TTCTATCAGA AGGGCACCGA ACTGACCCAG GCCCCGGTCT GGAAAGGCGC CACCAGCATT
GTCAAAGCCG GCCTGGCCGA CGACCTGACC CTGACCATGC CTAAGGGCCA GATGAAGCGC
CTCCAGGCGT CGATGACCAT GAACCCGCAG CTCACCGCAC CGATCGCCAA AGGTGACGTG
ATCGGTAAAG TGGAAGTCAA ACTGGACGAG AACGTGGTTC ACAGCGCCGA CCTGATCGCC
CTCGATGGCG TAGAGGAAGG TGGTTTCATC CGTCGTATGT GGGATAGCAT CCGTCTATTC
TTCTACGGGT TGTTCAACTG A
|
|---|
| Protein sequence | MNITNLAKRL CLPVLLMITP AAFAAEQMMP APPQLAAKSY VLMDASSGNV LVENNGDERL
PPASLTKLMT AYIATLDIRR GQIGENDPVT VSENAWRTGG SRMFIKVGSQ VTVSDLLHGI
IIQSGNDASV ALAEHIAGSE DAFADMMNKT AADLGMSNSH FMNPTGLPHP DHYSSAHDMA
TLARAIINVD PAHYAIYSQK EFFWNNIKQP NRNLLLWRDK TVDGLKTGHT EEAGYCMVAS
AVRDGQRLIA VVFGTNSEQS RAAETQKLLT YGFRFFETQT FYQKGTELTQ APVWKGATSI
VKAGLADDLT LTMPKGQMKR LQASMTMNPQ LTAPIAKGDV IGKVEVKLDE NVVHSADLIA
LDGVEEGGFI RRMWDSIRLF FYGLFN
|
|---|
| |