Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0560 |
Symbol | |
ID | 6109469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 620629 |
End bp | 621339 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620317 |
Product | ABC transporter related |
Protein accession | YP_001747434 |
Protein GI | 170719746 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.206066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.575191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC CGTTGATCGC GCTGCAAGAC CTGTTGTTCG CCTGGCCAGG GCAGCCGCCA TTGCTGGATA TCCCCGCGTT TCGCCTGGAA GCAGGCGAGG CCCTGTTCCT CAAAGGCCCC AGCGGCAGTG GCAAGACCAC CTTGCTGGGC CTGCTGGGCG GGGTGAACGT GCCAGCTCAG GGCCATATCC AGTTGCTCGG CCAGGATCTC GGCAGCCTTG GCCAAGGCGC CCGCGACCGC TTTCGGGTCG ATCACACCGG TTATATCTTC CAGCAGTTCA ACCTGCTGCC GTTCCTCTCG GTACGAGAAA ACGTCGAACT GCCTTGCCGC TTTTCGCACA GCCGGGCCGA CCGCGCCCGC CAACGCCACG GCAGTGTCGA CCAAGCTGCC AGCGAGCTGC TTGCCCATCT GGGCCTGAAC GACCCGGCAC TGCTTGCCCG CCGCGCCGAC AGCCTGTCGA TCGGCCAACA ACAAAGGGTG GCCGCTGCCC GAGCATTAAT CGGCCAACCC GAGCTGGTCA TTGCCGACGA ACCGACCTCG GCACTGGATG CCGACACCCG GGAAGCGTTC ATCCGCCTGC TGTTCGATGA ATGTCGCGCC GCCGGCTCCA GCCTGTTGTT CGTCAGCCAT GACCAGAGCC TGGCACCGCT GTTCGACCGT CATCTGTCAC TGGCCGAACT CAACCGCGCA GCCAAGCCCC GGGAGGCCTG A
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Protein sequence | MSLPLIALQD LLFAWPGQPP LLDIPAFRLE AGEALFLKGP SGSGKTTLLG LLGGVNVPAQ GHIQLLGQDL GSLGQGARDR FRVDHTGYIF QQFNLLPFLS VRENVELPCR FSHSRADRAR QRHGSVDQAA SELLAHLGLN DPALLARRAD SLSIGQQQRV AAARALIGQP ELVIADEPTS ALDADTREAF IRLLFDECRA AGSSLLFVSH DQSLAPLFDR HLSLAELNRA AKPREA
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