| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0513 |
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| Symbol | |
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| ID | 6109421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 562469 |
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| End bp | 563854 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620269 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001747387 |
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| Protein GI | 170719699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.227206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.370173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCG AAACCACCGC TTTTGCCACC TTGCCGCTGT CCGCCGCCAT GCTGGCCAAC
CTGGACGCCC TCGGCTATGC CTCGATGACG CCGATCCAGG CCCAGAGCCT GCCCGTCATC
CTCAGGGGCC AGGACCTGAT TGCCCAGGCC AAGACCGGCA GCGGCAAGAC CGCCGCCTTC
GGCATCGGCC TGCTCAACCC GATCAACCCG CGCTACTTCG GTTGCCAGGC ACTGGTACTG
TGCCCCACCC GCGAGCTTGC CGACCAGGTT GCCAAAGAGC TGCGCCGCCT GGCCCGCGCC
GAAGACAACA TCAAGATCCT CACCCTGTGC GGTGGCGTCT CGCTTGGCCC GCAGATCGCT
TCGCTGGAGC ATGGCGCGCA CATCATCGTC GGCACCCCAG GGCGCATCCA GCAACACCTG
GACAAAGGCA CCCTGGTGCT CGACGGGCTC AATACCCTGG TGCTGGACGA AGCCGACCGT
ATGCTCGACA TGGGCTTTTT CGACGCTATC GCCAGCATCA TCGGCAAGAC CCCGTCGCGC
CGCCAGACCC TGCTGTTCTC GGCCACTTAC CCCGCCGGTA TCGAGCAACT GGCCGCCGAC
TTCATGCGCA AGCCGCAGCA GGTCAAGGTC GAGAGCCTGC ACACCGACAA CCAGATCGAA
CAGCGCTTCA TCGAGATCGA CCCGCAACAG CGCCTGGAGG CCGTCACCCG CGTGCTCGGC
CACTACCGCC CGCAGTCCTG CGTGGCGTTC TGCTTCACCA AGCAGCAGTG CGAGGACGTG
GTTGCCCACC TCACCGCCAA GGGCATCGTG GCCCAGGCCC TGCACGGCGA CCTCGAGCAG
CGCGACCGCG ACCAGGTGCT GACCATGTTC GCCAACCGCA GCAGTTCGGT GCTGGTGGCC
ACTGATGTGG CCGCACGCGG TCTGGATATC GATGGCCTGG ACATGGTCAT CAACGTGGAG
CTGGCGCGCG ATGCCGAGAT CCACGTGCAC CGCGTCGGCC GTACCGGTCG GGCGGGCGAG
AAAGGCATTG CCGTGAGCCT GGTCGCTCCG GCTGAAGGCC ATCGCGCCCA GGCCATCGAG
GCGCTGCAGA AGAGTCCGCT GCGCTGGGAC CAGCTGGACA GCCTGAAGAA CAAAGGTGGC
GAACTGCTGC TGCCGGTCAT GACCACGCTA TGCATCGCCG CTGGTCGCAA GGACAAGCTG
CGCCCGGGAG ACATCCTGGG TGCGCTGACC GGTGATGCCG GCATCCCGGG CAAGCAGGTG
GGCAAGATCG CCATCTTCGA CTTCCAGGCC TTCGTGGCGG TGGAGCGGGC CCTGGCCAAG
CAGGCGATGC AGCGCCTGAA CAGCGGCAAG ATCAAGGGCC GCGCCCTGAA AGTTCGCATT
CTCTGA
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| Protein sequence | MTTETTAFAT LPLSAAMLAN LDALGYASMT PIQAQSLPVI LRGQDLIAQA KTGSGKTAAF
GIGLLNPINP RYFGCQALVL CPTRELADQV AKELRRLARA EDNIKILTLC GGVSLGPQIA
SLEHGAHIIV GTPGRIQQHL DKGTLVLDGL NTLVLDEADR MLDMGFFDAI ASIIGKTPSR
RQTLLFSATY PAGIEQLAAD FMRKPQQVKV ESLHTDNQIE QRFIEIDPQQ RLEAVTRVLG
HYRPQSCVAF CFTKQQCEDV VAHLTAKGIV AQALHGDLEQ RDRDQVLTMF ANRSSSVLVA
TDVAARGLDI DGLDMVINVE LARDAEIHVH RVGRTGRAGE KGIAVSLVAP AEGHRAQAIE
ALQKSPLRWD QLDSLKNKGG ELLLPVMTTL CIAAGRKDKL RPGDILGALT GDAGIPGKQV
GKIAIFDFQA FVAVERALAK QAMQRLNSGK IKGRALKVRI L
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