| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0485 |
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| Symbol | |
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| ID | 6109393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 531400 |
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| End bp | 533292 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620241 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001747359 |
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| Protein GI | 170719671 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG CTTCCCTCGG TCTCTCCGAG GCACTTGTCC GCGCTATCGA GGCTGCGGGC
TATACCCAGC CGACTCCGGT GCAACAGCGG GCGATTCCCG CCGTGTTGCA AGGCCGCGAC
CTGATGGTCG CCGCACAGAC AGGTACAGGT AAAACCGGCG GTTTCGCCCT ACCGATCCTT
GAGCGCCTGT TCCCGGCGGG TCACCCGGAC AAATCACAGC GCCATGGCCC GCGCCAACCG
CGCGTGCTGG TCCTGACCCC GACCCGCGAA CTGGCGGCTC AGGTACACGA CAGCTTCAAG
GTTTACGCTC GCGACCTGCC ACTGGTCAGT GCCTGCATTT TCGGCGGCGT TGGCATGAAC
CCGCAGATCC AGGCCATTGC CAAAGGTGTA GATGTTCTGG TGGCCTGTCC GGGTCGCCTG
CTTGACTTGG CAGGGCAAGG CCGGGTCGAC TTGGCCCACG TGGAAATCCT GGTCCTCGAC
GAAGCCGACC GCATGCTCGA CATGGGCTTC ATCCACGACG TCAAGAAGGT CCTCGCCCGC
CTGCCGGCCA AACGGCAGAA CCTGCTGTTC TCGGCGACGT TCTCCAAAGA CATCACCGAC
CTCGCCGACA AGCTCCTGCA CAACCCGGAG CGCATCGAGG TCACCCCGCC GAACACTACC
GTCGAGCGTA TCGAGCAGCG CGTCTACCGC CTGCCCGCCA GCCACAAGCG CGCGCTGCTG
GCCCACCTGA TCACGCTTGG CGCCTGGGAG CAGGTACTGG TATTCACCCG TACCAAGCAC
GGTGCCAACC GTCTGGCCGA GTACCTGGAA AAGCACGGTC TGAGCGCCGC TGCCATCCAC
GGCAACAAGA GCCAGAACGC TCGTACAAAG GCCTTGGCCG ACTTCAAGGC CAACAGCGTA
CGCGTACTGG TCGCCACCGA CATTGCTGCC CGTGGCCTGG ACATCGACCA ACTGCCGCAT
GTAGTCAACT TCGAGCTGCC CAATGTCGAG GAAGACTACG TTCACCGTAT CGGCCGCACC
GGCCGTGCCG GCCGCTCGGG CGAGGCCATT TCGCTGGTCG CGCCGGATGA AGAAAAGCTG
CTCAAGAGCA TTGAGCGGGT CACCAGGCAG AAGATCGCCG ACGGCGACCT GATGGGCTTC
GACCCAAGCC AGGTAGAAGC CGAGAAACCT GAGGTGCGTG AACGCCCGCA GAACAACGGT
CGCGGCGGCC GCAATCAGCA GGCCCGTGGT GACGGTGGCA AAGATGGCAG TGGCGGCCGC
AAGGACAAGG GCAAAGATAA AGGCAAGGCC AAGCAGCAGG CTGCCGACAA GCCTGCCGAC
AAGGAAAAGT CCGCCGACAA GCAGCAGCCG CGCAAGCCGC GCGACAAGAA GCCGCGCCAA
CAGCAAGCCA GCCAGAACAG TGTGCCGAAG GCACCGGCCG ACCGTGCTCC GGATGAATTC
CTGGACGACG AAATCGACAA CTTCGGTAAC CGTGCCGACT ACGTCAGCCC CTACCAGAAT
GCCAAGAACC AGGGCCGCAA CCGTCGCCCG GGTGCTAGTG CCGGAGCCGG TCAAGGCCAA
GCCAGCCCTG GGCGCAGCAA CAGTGGTGGT GGCCAAGGGC GTAACGGCGG CCAGCCGCGC
AACGCCAGTG GCGAGAAACG CCCGCCGCGC AACAACAAGG GTGGTGATGC GCGCCGCGAT
AGCAACGGTG GCGGCCGCAA CCGTTCGGCC GGCCGTGATG ACGCATCCCG TCAGGAACCG
GCAGTACGTA GCTCGCGAGA GCCGCAAAAC CAGCCTGTGA TCATTCGCAA GGAGTCCAAG
CTCGACCGTT TCCCAACGCC TGAGCAACTG GACGATCTGC CAAGCCGACC ACGCGGTGAA
CGGCCTGCGT TACTGACCCG CAAGGGCGGC TGA
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| Protein sequence | MSFASLGLSE ALVRAIEAAG YTQPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL
ERLFPAGHPD KSQRHGPRQP RVLVLTPTRE LAAQVHDSFK VYARDLPLVS ACIFGGVGMN
PQIQAIAKGV DVLVACPGRL LDLAGQGRVD LAHVEILVLD EADRMLDMGF IHDVKKVLAR
LPAKRQNLLF SATFSKDITD LADKLLHNPE RIEVTPPNTT VERIEQRVYR LPASHKRALL
AHLITLGAWE QVLVFTRTKH GANRLAEYLE KHGLSAAAIH GNKSQNARTK ALADFKANSV
RVLVATDIAA RGLDIDQLPH VVNFELPNVE EDYVHRIGRT GRAGRSGEAI SLVAPDEEKL
LKSIERVTRQ KIADGDLMGF DPSQVEAEKP EVRERPQNNG RGGRNQQARG DGGKDGSGGR
KDKGKDKGKA KQQAADKPAD KEKSADKQQP RKPRDKKPRQ QQASQNSVPK APADRAPDEF
LDDEIDNFGN RADYVSPYQN AKNQGRNRRP GASAGAGQGQ ASPGRSNSGG GQGRNGGQPR
NASGEKRPPR NNKGGDARRD SNGGGRNRSA GRDDASRQEP AVRSSREPQN QPVIIRKESK
LDRFPTPEQL DDLPSRPRGE RPALLTRKGG
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