Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0447 |
Symbol | |
ID | 6109355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 494237 |
End bp | 495028 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641620203 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001747321 |
Protein GI | 170719633 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.497745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA AACCGCAAGA CGACCAGCCC ATGCCGCTGG TCTCGCACCT GACCGAACTG CGCACCCGCC TGCTGCGCTG CGTGGCCGCC ATCTTCCTTA TTTTTGCCGG GCTGTTCTCC TTCGCCCAGC AGATCTACAC CTTGGTCTCG GCCCCACTGC GCGAGCACTT GCCGGCAAAC GCCACGATGA TTGCCACCGA CGTGGCCTCG CCGTTCCTCA CGCCGTTCAA GCTGACCATG ATCGTTTCGC TGTTCCTGGC GATCCCGTTC ATCCTGCAGC AGATCTGGGG TTTTATCGCG CCTGGCCTGT ATCGCCACGA AAAGCGCATC GCCATTCCGT TGCTGGTGTC GAGCATCTTC CTGTTCTATG CCGGCATGGC CTTCGCCTAC TTCCTGGTGT TCCCGCTGAT CTTCGGCTTC TTCGCCAGCG CCACGCCGGA AGGTGTGTCG ATGATGACCG ACATTTCCAG TTATCTGGAC TTCGTCATGA CATTGTTCTT CGCCTTCGGT GTTGCCTTCG AGATCCCGGT AGCGGTGGTG CTGCTGGTGT GGATCGGCGT AGTCGACGTG CAATACCTGA AGAAAATCCG TCCCTACGTG ATCATCGGCT GCTTCGTGGT CGGCATGATC CTGACCCCGC CCGACATCTT CTCGCAGACC TTGCTCGCCG TGCCCATGTG GCTGCTGTTC GAGATCGGCG TGCTGTGTGG CAGCCTGATC CGCAAGCGCA GCCACGCCGA AGATGACACG GCAAACGACC CCAACGACCA GCCACCAGCG ACCCAGCCGT GA
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Protein sequence | MSEKPQDDQP MPLVSHLTEL RTRLLRCVAA IFLIFAGLFS FAQQIYTLVS APLREHLPAN ATMIATDVAS PFLTPFKLTM IVSLFLAIPF ILQQIWGFIA PGLYRHEKRI AIPLLVSSIF LFYAGMAFAY FLVFPLIFGF FASATPEGVS MMTDISSYLD FVMTLFFAFG VAFEIPVAVV LLVWIGVVDV QYLKKIRPYV IIGCFVVGMI LTPPDIFSQT LLAVPMWLLF EIGVLCGSLI RKRSHAEDDT ANDPNDQPPA TQP
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