| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0413 |
|---|
| Symbol | |
|---|
| ID | 6109321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 447298 |
|---|
| End bp | 447759 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620170 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001747288 |
|---|
| Protein GI | 170719600 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.85413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACG TCATCCTCTT TCAACCTGAA ATTCCGCCCA ATACCGGCAA TATCATTCGC
CTCTGCGCCA ACAGCGGCTG CGCCCTGCAT CTGATCGAGC CAATCAGCTT CGAGCTCGAC
GACAAGCGGC TGCGCCGCGC AGGGCTGGAT TATCATGAGT ATGCCACGCT CAAGCGCCAC
GAAAGCCTGG CCCGATGCCT GGAGAACCTG GGCAACCCAC GCTTGTTCGC CTTTACCACC
AAGGGGTCGC ACCCATTTCA TGAGGTTGCC TACCAGCCGG GCGACGCCTT CCTGTTCGGG
CCAGAAAGCC GTGGCCTGCC GGCCGAGGTG CTGGACAGCC TGCCGGCCGA GCAGCGCCTG
CGCTTGCCGA TGATGCCGGG ATGCCGCAGC CTGAACCTGT CCAACACCGT GGCGGTGACG
GTGTATGAGG CGTGGCGGCA GCAGGGGTTT GCCGGCAGCT GA
|
|---|
| Protein sequence | MFHVILFQPE IPPNTGNIIR LCANSGCALH LIEPISFELD DKRLRRAGLD YHEYATLKRH
ESLARCLENL GNPRLFAFTT KGSHPFHEVA YQPGDAFLFG PESRGLPAEV LDSLPAEQRL
RLPMMPGCRS LNLSNTVAVT VYEAWRQQGF AGS
|
|---|
| |