Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0327 |
Symbol | |
ID | 6109107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 342520 |
End bp | 343389 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620084 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001747202 |
Protein GI | 170719514 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.621945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAGTG CCGAGCTCAA AGCCTTCTAC ATGGTGGCCC GCCTGGGCAG CATCACCCTG GCGGCAAAGA AACTTGGCCT CAGCCAGCCG ACGGTGACCA CCCAGATCCG CAACCTCGAA AGCCAGTACG CGGTGGAGCT GTTCTACCGC GGCGGCCGAC GCCTGGTGCT GAGCGAGGAG GGCGTGCGCC TGCTGCCGAT GGTCAAGGCG CTGCTGCAAC AGGAAGCTGA TATCGAGTTC GAGCTGCGCA ACAGCGGCCA TGCCCAAGGC AACCTGCGCA TCGCTGCCAC CGCGCCGTAT TACATCCTCG ACCTTGTGAA GATCTTCCGT GAGCGCTTGC CACAGGTGGG CGTGACCGTG GAAATCGGCA ATTCGCAGCA GGTGCTGGAG ATGCTGGAGG ACTACCGCGT CGATGTCGCC GCCTCTTCAC AGTTGGTGGA GGATGCTCGC CTGGTGAGGC GCGTGCTGGG CACTGACCCG CTGGTGGTGG CGGTGCACCG CAATCATCCG CTGGCGCACC GTCAAGTGGT ATCTATCGAG GTGGTGGCAG GGCAATGCCT GCTGATGCGC GAAAAAGGCT CGACCACGCG CAAGCTCACC GAAGAAATGA TGCACGGCGC TGGGCTGAAG GCCGAAGCGG TGCTGGAAAT CGGCAGCCGC GAGTCGATCC GTGAGGCGGT GCTGCGCAAT ATCGGCGTCA GCGTGATTGC CCGGCACGAG GTGCCGCACA ACTCGGAGCT GCGGGTGCTG ACACTGGAAG ACGCGCCGGT GATGCATGAG TACCTGTACT GCCTGAAGGA AAGACGCCAG GCCCGGTTGC CGGCAGCCTT TCTCGGTGTA GCGCAAGAAG TGGTGGGGTC GCAGTTCTGA
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Protein sequence | MLSAELKAFY MVARLGSITL AAKKLGLSQP TVTTQIRNLE SQYAVELFYR GGRRLVLSEE GVRLLPMVKA LLQQEADIEF ELRNSGHAQG NLRIAATAPY YILDLVKIFR ERLPQVGVTV EIGNSQQVLE MLEDYRVDVA ASSQLVEDAR LVRRVLGTDP LVVAVHRNHP LAHRQVVSIE VVAGQCLLMR EKGSTTRKLT EEMMHGAGLK AEAVLEIGSR ESIREAVLRN IGVSVIARHE VPHNSELRVL TLEDAPVMHE YLYCLKERRQ ARLPAAFLGV AQEVVGSQF
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