Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0316 |
Symbol | |
ID | 6109096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 330321 |
End bp | 331835 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620073 |
Product | threonine dehydratase |
Protein accession | YP_001747191 |
Protein GI | 170719503 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.167113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC AGTACGTCAA GAAGATCCTC ACCTCGCGCG TCTACGACGT CGCTGTCGAA ACCCCGCTGC ACAGCGCCGG GCAACTGAGC AAGCGCCTGG GCAACCAGAT TTTGCTCAAG CGTGAAGACC TGCAGCCGGT GTTCTCCTTC AAGATCCGTG GGGCTTACAA CAAGCTGGCG CAACTGAGCC CGGAAGAACT GGCGCGCGGC GTGGTCACCG CCTCGGCCGG CAACCATGCA CAGGGGCTGG CCCTGGCAGC CCGCGAGCTG GGCATCAAGG CCACCATCGT GATGCCCAAG ACCACCCCGG AGATCAAGAT CGAAGGCGTA CGCTCGCGTG GCGGCAAGGT GGTACTGCAT GGCGACTCGT TCCCCGAGGC GCTGGCCTAC TCGCTGAAAC TGGTCGATGA AAAGGGCTTC GTCTATATCC ATCCTTATGA CGACCCGCAC ACCATTGCCG GGCAAGGCAC CGTGGCAATG GAAATCCTGC GCCAGCACCC TGGCCGGCTG GATGCTATCT TCGTGCCGGT GGGCGGCGGT GGGCTGATCG CCGGCATCGC CGCCTACGTT AAATACCTTC GCCCTGAAAT CAAGGTGATT GGCGTCGAGC CGGATGACTC CAATTGCCTG CAAGCGGCCA TGGCCGCCGG GGAGCGCGTG GTGCTGCCGC AGGTCGGGCT GTTTGCCGAT GGCGTGGCCG TGGCGCAGAT CGGCCAGCAT ACCTTCGACA TCTGCCGCTT GCATGTGGAT GAAGTGGTTA CCGTCAGTAC TGACGAGATC TGCGCAGCAA TCAAGGATAT CTACGACGAT ACACGCTCTA TCACCGAGCC TGCAGGCGCC TTGGGTGTTG CTGGGATCAA GAAGTATGTG GAGCTCAACG GTGTAACCGG GCAAACGCTG GTGGCCATTG ACTCGGGTGC CAACGTCAAC TTCGACCGCC TGCGTCACGT CGCCGAGCGT GCCGAGCTGG GCGAGAAACG CGAAGCGATT ATCGCCGTGA CCATTCCCGA GCGCCCGGGC AGCTTCAAGG CGTTCTGCGA GGCCATCGGC AAGCGCCAGA TCACCGAATT CAACTACCGC AAGCACACAT CTGACGAAGC CCATATCTTC GTTGGCGTGC AGACCCATCC GGAGAACGAC CCGCGCGCTG CGTTGGTGCA GCAACTGACT GAGCAGGGCT TCCCGGTCAC CGACCTTACT GACAACGAAC TGGCCAAGAT GCACATCCGC CACATGGTGG GTGGCCATTC GGCCGGCGCC CGCGACGAGA TTGTGCTGCG CTTCGAATTC CCTGAGCGGC CTGGGGCGCT GTTCAACTTC CTCAACAAGC TGGGCGGGCG CTGGAACATC TCGATGTTCC ACTACCGCAA CCACGGTGCT GCCGATGGGC GTGTGGTGGC GGGGTTGCAG GTGCCTGAGG ACGAGCGCCA CCTGGTGCCG GCGGCGCTGG CCAAGATCGG ATATCCGTAC TGGGATGAGA CAGACAATCC GGCTTACCGG CTGTTCCTGG GTTGA
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Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLHSAGQLS KRLGNQILLK REDLQPVFSF KIRGAYNKLA QLSPEELARG VVTASAGNHA QGLALAAREL GIKATIVMPK TTPEIKIEGV RSRGGKVVLH GDSFPEALAY SLKLVDEKGF VYIHPYDDPH TIAGQGTVAM EILRQHPGRL DAIFVPVGGG GLIAGIAAYV KYLRPEIKVI GVEPDDSNCL QAAMAAGERV VLPQVGLFAD GVAVAQIGQH TFDICRLHVD EVVTVSTDEI CAAIKDIYDD TRSITEPAGA LGVAGIKKYV ELNGVTGQTL VAIDSGANVN FDRLRHVAER AELGEKREAI IAVTIPERPG SFKAFCEAIG KRQITEFNYR KHTSDEAHIF VGVQTHPEND PRAALVQQLT EQGFPVTDLT DNELAKMHIR HMVGGHSAGA RDEIVLRFEF PERPGALFNF LNKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPEDERHLVP AALAKIGYPY WDETDNPAYR LFLG
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