| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0295 |
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| Symbol | |
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| ID | 6109075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 311103 |
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| End bp | 311897 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641620052 |
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| Product | TonB family protein |
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| Protein accession | YP_001747170 |
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| Protein GI | 170719482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.14734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATG TCCATTCGGC CGTCAGGGCC TACGACCAGC CACGGCACCC TGCACCGGGT
GACCTGGTCG AGCTTGGACG GACGCTTCGC TTGCCGTTGG GCCAGCTCCG CCTGCAACGT
ACCCCGGCCA GCGGCCTCAA GCGCCGCGAC AAGCTGGCGC TGGCTTTGCT GGTGCTGGCT
GTGCACGGTG CTGCCGCCTT TTGGGTGAGC CGGGCCCCGA CGCGGGAGTT GCCCGTAGTA
CCGCCACAAA TTCCTCCCAT GACCATCGAG TTTGCCGCCC CGGCACCTCC GGTAGTCGAG
CCGCCACCGC CGGCCCCGGC ACCGCCGGTT GTCGAGCCGC CTCCACCTGT AGTTGACGAA
TTGGCCGCCA AACCCAAGCC CAAGCCAAAA CCCGCTCCTA AGCCGCTGGC CAAGCAACCG
CCCAAACCAC AGCCCAAGCC TGTGGAGGCA CCACCGCCTG CCCCCACACC GGTCGCCGCT
CCTTCAACGC CTGCGCCACC CGCGCCGGCC CCGGTAACGC CGCCCTCGGC CAACGCTGCG
TACCTGAAGA ACCCGGCGCC GGAGTACCCG CAGATGGCTC AGCGCCGCGG CTGGGAAGGC
ACCGTATTGC TACGGGTGGA GGTTTTGGCC AGCGGCAAAC CCGGGCATAT CCAAGTCCAG
AAAAGCAGTG GTCGCGATGC CCTCGACGCT GCCGCCCTGG CTGCGGTCAA GCGCTGGAGT
TTCGTCCCCG CCAAGCAGGG CGACGTGGCG CAGGCCGGCT GGGTCAGCGT GCCGATCGAT
TTCAAGCTTC GTTAA
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| Protein sequence | MGNVHSAVRA YDQPRHPAPG DLVELGRTLR LPLGQLRLQR TPASGLKRRD KLALALLVLA
VHGAAAFWVS RAPTRELPVV PPQIPPMTIE FAAPAPPVVE PPPPAPAPPV VEPPPPVVDE
LAAKPKPKPK PAPKPLAKQP PKPQPKPVEA PPPAPTPVAA PSTPAPPAPA PVTPPSANAA
YLKNPAPEYP QMAQRRGWEG TVLLRVEVLA SGKPGHIQVQ KSSGRDALDA AALAAVKRWS
FVPAKQGDVA QAGWVSVPID FKLR
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