Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0283 |
Symbol | |
ID | 6109063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 296872 |
End bp | 298077 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641620040 |
Product | extracellular solute-binding protein |
Protein accession | YP_001747158 |
Protein GI | 170719470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTG ATGATTGCGG CATCGTGGCT GCGAAGGTAA GTTGCGCGCC GGTTTTGCGT GCGTGGCAGC GCTGCGCCGT TACCAAGGCA CTGATTGTGA GGACCACCCA CTTGTCTATT TCTGTATTAC GCAAAGCCTT GATGGCTGGA GCGGGCCTGA CGCTGGCATG CAGCGTCCAA GCGGCGCCTA CGGTGCACTT TTATAACTGG TCCGACTACA TTGGCCCGAC CACGCTCGAA GACTTCGAGA AAGCCACGGG TATCAAACCT GTGCAGGACG TGTTCGACTC CAACGAAACC CTGGAAGGCA AGCTGCTGGC CGGCAACACC GGCTATGACG TGGTAGTGCC GTCTAACCAT TTTCTCGGCA AGCAGATCAA GGCGGGCGCG TTCCAGAAGC TCGACAAGAA CCTGCTGCCC AATTATTCCA ACCTGGACCC GGCGTTGATG AAGCGCCTGG AAAAGAACGA CCCAGGCAAC CAGTACGCCG TGCCTTACCT GTGGGGCACC AATGGCATCG GCTACAACGT CGACAAGGTC AAGGCGGCAC TGGGCGTGGA CACCATCGAT TCCTGGGCCG TGCTGTTCGA GCCCGAGAAC ATGAAGAAGC TCTCCCAATG CGGCGTGGCC TTCCTGGACT CGGCGGATGA AATGCTGCCA GCGGTGCTCA ACTATATGGG GCTGGACCCC AACAGCACCA ACCCCAAGGA CTACGAGAAG GCCGAGCAGA AGCTGCTGGC GGTACGCCCG TACGTGACCT ACTTCCACTC GTCCAAGTAC ATCACGGACC TGGCCAACGG CGACATCTGC GTCGCGGCAG GTTTTTCCGG CGATGTGTTC CAGGCCAAGG CCCGCGCTGA AGAAGCGGAG AAAGGCGTGA ACCTGGCCTA CGCGATTCCC AAGGAAGGCG GCAACCTCTG GTTCGACGTG CTGGCAGTCC CCAAGGACGC CAAGAACGTC AAAGAGGCTC ACGCCTTCAT CAACTATTTG CTGAAACCTG AGGTTATCGC CCAGGTCAGT GATTACGTCG GTTACGCCAA CCCGAACCCC AAGGCTGGCG ACCTGATGGA CCAGGCCGTG AGGACTGACG CCGCGGTTTA CCCACCGCAG GAAGTGCTGG ACAAGATGTT CGTCAACAGT GAGTTGCCAC CCAAGGTGCA ACGTTTGATG ACCCGCAGCT GGACCAAGGT CAAGTCGGGC AAGTAA
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Protein sequence | MAIDDCGIVA AKVSCAPVLR AWQRCAVTKA LIVRTTHLSI SVLRKALMAG AGLTLACSVQ AAPTVHFYNW SDYIGPTTLE DFEKATGIKP VQDVFDSNET LEGKLLAGNT GYDVVVPSNH FLGKQIKAGA FQKLDKNLLP NYSNLDPALM KRLEKNDPGN QYAVPYLWGT NGIGYNVDKV KAALGVDTID SWAVLFEPEN MKKLSQCGVA FLDSADEMLP AVLNYMGLDP NSTNPKDYEK AEQKLLAVRP YVTYFHSSKY ITDLANGDIC VAAGFSGDVF QAKARAEEAE KGVNLAYAIP KEGGNLWFDV LAVPKDAKNV KEAHAFINYL LKPEVIAQVS DYVGYANPNP KAGDLMDQAV RTDAAVYPPQ EVLDKMFVNS ELPPKVQRLM TRSWTKVKSG K
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