| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0279 |
|---|
| Symbol | |
|---|
| ID | 6109059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 290834 |
|---|
| End bp | 292210 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620036 |
|---|
| Product | glutamate--putrescine ligase |
|---|
| Protein accession | YP_001747154 |
|---|
| Protein GI | 170719466 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTAC CCCCGCGTGC CGTTCAGCTT AACGAAGCGA ACGCGTTCCT TAAGGAACAT
CCTGAGGTTC TCTACGTTGA CCTTCTGATT GCAGATATGA ATGGTGTGGT GCGCGGCAAG
CGCATAGAGC GCACCAGCCT CCACAAGGTT TACGAGAAAG GCATCAACCT GCCGGCCTCC
CTCTTCGCCC TCGATATCAA CGGTTCCACC GTCGAAAGCA CCGGGCTTGG CCTGGACATC
GGCGATGCTG ACCGCATCTG CTATCCGATC CCGGATACGC TCTGTAACGA GCCGTGGCAG
AAACGCCCAA CCGCACAGCT GCTGATGACC ATGCACGAGC TTGAAGGCGA GCCTTTCTTC
GCCGACCCTC GTGAAGTGCT GCGTCAGGTG GTGAGCAAGT TCGACGACCT GGGCCTGACC
ATCTGCGCCG CGTTCGAACT GGAGTTCTAC CTGATCGACC AGGAGAACGT GAACGGCCGC
CCGCAGCCAC CACGCTCACC GATCTCGGGC AAGCGCCCGC AGTCGACCCA GGTGTACCTG
ATCGACGATC TCGACGAATA CGCCGATTGC CTGCAGGACA TCCTCGAAGG CGCCAAGGAG
CAAGGCATTC CGGCCGACGC CATCGTCAAG GAAAGCGCCC CGGCACAGTT CGAAGTCAAC
CTGCACCACG TCCCCGACCC GCTCAAGGCC TGTGACTATG CAGTGCTGCT CAAGCGCCTG
ATCAAGAACA TCGCCTACGA CCATGAAATG GATACCACGT TCATGGCCAA GCCCTACCCG
GGCCAGGCAG GCAACGGCCT GCATGTACAC ATTTCCGTGC TGGACAAGGA TGGCAACAAC
ATCTTCACCA GCGAGGATCC CGAGCAGAAC GCCGCGCTAC GTCACGCTGT CGGCGGTGTG
CTCGAGACCC TGCCTGCGTC GATGGCGTTC CTTTGCCCGA ACGTCAACTC GTATCGTCGC
TTTGGCGCTC AGTTCTACGT GCCGAACGCG CCGAGCTGGG GCCTGGACAA CCGCACCGTA
GCCCTGCGCG TGCCGACCGG CTCGCCCGAC GCAGTACGCC TTGAGCACCG CGTGGCCGGC
GCCGACGCCA ACCCGTACCT GATGATGGCC GCCGTGCTGG CTGGTGTGCA CCATGGTCTG
ACCAACAAGG TCGAGCCGGG TGAGCCGATC GAAGGCAACT CGTACGAGCA GCTGGAGCAG
AGCCTGCCGA ACAACCTGCG CGATGCTCTG CGCGAGCTGG ACGACAGCGA GATCCTGAAC
AAGTACATCG ATCCGAAGTA CATCGACATC TTCGTCGCGT GCAAGGAGAG CGAGCTGGAG
GAGTTCGAGC ATTCGATCTC CGACCTCGAG TACAACTGGT ATCTGCATAC CGTGTAA
|
|---|
| Protein sequence | MSVPPRAVQL NEANAFLKEH PEVLYVDLLI ADMNGVVRGK RIERTSLHKV YEKGINLPAS
LFALDINGST VESTGLGLDI GDADRICYPI PDTLCNEPWQ KRPTAQLLMT MHELEGEPFF
ADPREVLRQV VSKFDDLGLT ICAAFELEFY LIDQENVNGR PQPPRSPISG KRPQSTQVYL
IDDLDEYADC LQDILEGAKE QGIPADAIVK ESAPAQFEVN LHHVPDPLKA CDYAVLLKRL
IKNIAYDHEM DTTFMAKPYP GQAGNGLHVH ISVLDKDGNN IFTSEDPEQN AALRHAVGGV
LETLPASMAF LCPNVNSYRR FGAQFYVPNA PSWGLDNRTV ALRVPTGSPD AVRLEHRVAG
ADANPYLMMA AVLAGVHHGL TNKVEPGEPI EGNSYEQLEQ SLPNNLRDAL RELDDSEILN
KYIDPKYIDI FVACKESELE EFEHSISDLE YNWYLHTV
|
|---|
| |