Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0243 |
Symbol | |
ID | 6109022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 257189 |
End bp | 257899 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641619999 |
Product | hypothetical protein |
Protein accession | YP_001747118 |
Protein GI | 170719430 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.181438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.791089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATC AGCCCAAGGT TGTACCCCAG CAGTCCAGTG AGCTCGATGC CGAAGCGGTG GTCGCCTACC TGCGCGCCCA CCCGACCTTC TTCGCCGAAC ACGACGAACT GTTGGTCGAG CAACGTATCC CTCACCAGCG TGGCGACAGC GTGTCGCTGG TGGAACGCCA GCTCAAACTG CTGCGCGATC GCAACATCGA GATGCGCCAT CGCCTGTCAC AACTGATGGA CGTGGCCCGG GACAACGACC GGCTGTTCGA AAAGACTCGC CGGCTGATCC TCGACCTGCT CGATGCCGGC AGCCTGGAAG AAGTGGTCAT GGCGGTCGAA GACAGCCTGC GCCAGGAGTT CCAGGTCCCG TTCGTCAGCC TGATCCTGTT CGGTGACCAT GCAGCGCCAG TCGGCCGTTG GGTCAGTAAT GCCGAGGCCC AGCAGGCCAT CGGCGGCCTG CTGGGCGGCG GCAAGACAGT CAGTGGCAAC CTGCGTGAGC ACGAACTGGC CTTCCTGTTC GGTGAGGAGC AGCACCATGA AGTGGGCTCC AGCGCCGTCG CTGCCCTGGA GTACCAAGGG TTGCACGGCG TGCTGGCGAT CGGCAGCCGC GATCCGCAAC ACTACAAGAG CAGCGTCGGC ACCCTGTTCC TTGGCTACAT CGCCGAAGTG CTAGGCCGCG TGGTGCCGCG CGTTACCCAG CCCCTGCGCC CGGTGCGCTG A
|
Protein sequence | MTDQPKVVPQ QSSELDAEAV VAYLRAHPTF FAEHDELLVE QRIPHQRGDS VSLVERQLKL LRDRNIEMRH RLSQLMDVAR DNDRLFEKTR RLILDLLDAG SLEEVVMAVE DSLRQEFQVP FVSLILFGDH AAPVGRWVSN AEAQQAIGGL LGGGKTVSGN LREHELAFLF GEEQHHEVGS SAVAALEYQG LHGVLAIGSR DPQHYKSSVG TLFLGYIAEV LGRVVPRVTQ PLRPVR
|
| |