| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0224 |
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| Symbol | |
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| ID | 6109003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 233186 |
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| End bp | 234448 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619980 |
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| Product | outer membrane porin |
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| Protein accession | YP_001747099 |
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| Protein GI | 170719411 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.79572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG CCACTCACGG ACCAGGCCGC GCCCTGCTCG CCACCCTCGC CCTCTGCCCC
GCGCTCAGTC AGGCAGAAGA CCCCGGCTGG TCGCTGCTCA GCCGCAACTA TTTTCTGCAC
AGCGACTTCC GCTCGCCTTC CGGCAGCGGC CAGAACTACC GCCAGGAATG GGCCCAAGGT
TTCATCGGCG AGATTCGCTC CGGTTTCACC GAAGGCCCTG TCGGTGTAGG CATCGACGCC
CATGGTTTCC TTGGCCTCAA GCTCGACGGT GGCCGAGGCC ATGCCGGCAC CGGCCTGCTG
CCACGTGACA GCGACGGCCG CGCCGCGTCC GACTATTCCA GCGCCGGCGC CGCCCTGAAG
TTCCGCCTGG GCAACACGCA ATTGCGCTAC GGCGAATTGA TGGTGGAAAC CCCGGTGTTC
GACACCGGCG ACAAACGCCT GCACCCGGAA TACGCCACCG GCTGGCTGCT GGAGAACACC
GACCTGCCCG ACTGGCACCT GCAGGCTGGG CGCTTCACCG CGTTCAACAA CCAGGACAAC
AGCTCGACCC ATGACGACTT CAGCGGCTAC GGCGCCACCA CCCAAGGCCG CGCCATCAGC
CTGGCCGGCG CCACTTTCGC GCCTGATGGG CCGTTCGGCG GCGCGCTGTA CGCCGGGCAG
CTGCAGGACA CCTGGCGCCA GGCCTACCTC AACCTGAACC TGGCCGAGGG CAACTGGCGC
CTGGACGGCA ACCTGTACCA GACCCGCGAC ACCGGCAACG CCAGTGCCGG CGCCATCGAC
ACCCTCGCCT ACAGCCTTTC AGGCAAATAC CGCTTCGGTG CTCAAGCCGT GACCCTGGCG
TACCAGAAGA TCGAGGGCGA CACCCCGTTC GACTTCGTCG GCGGCGACTC CATCTACCTG
GCAAACTCGA TCAAATACGC CGACTTCAAC GGCCCAGGCG AGCGCTCTTG GCAACTGCGC
TACGACCTCA ATTTCGCCAC CCTCAGCGTG CCCGGTCTTA GCCTGATGGC GCGTTATGTA
AGTGGTAGCG CGATCGATGG CACGCATGCT CCGGCGGGCG GTGCCTACAC GGGCCAGCAG
GGTCAAGGTG GGCGCCACTG GGAACGCGAC ATCGACCTCA AGTATGTGGT GCAGTCCGGC
GCCGCCAAGG ACCTCAGCCT GTCGTTCTCA CACGTCAGTC ACCGCGCCAA CGAGGCACAG
GCAGGCGACG ACATTGACCG CATCTACCTG ATCATCGAAT ACCCACTCAA AGGCAGCTTC
TGA
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| Protein sequence | MIRATHGPGR ALLATLALCP ALSQAEDPGW SLLSRNYFLH SDFRSPSGSG QNYRQEWAQG
FIGEIRSGFT EGPVGVGIDA HGFLGLKLDG GRGHAGTGLL PRDSDGRAAS DYSSAGAALK
FRLGNTQLRY GELMVETPVF DTGDKRLHPE YATGWLLENT DLPDWHLQAG RFTAFNNQDN
SSTHDDFSGY GATTQGRAIS LAGATFAPDG PFGGALYAGQ LQDTWRQAYL NLNLAEGNWR
LDGNLYQTRD TGNASAGAID TLAYSLSGKY RFGAQAVTLA YQKIEGDTPF DFVGGDSIYL
ANSIKYADFN GPGERSWQLR YDLNFATLSV PGLSLMARYV SGSAIDGTHA PAGGAYTGQQ
GQGGRHWERD IDLKYVVQSG AAKDLSLSFS HVSHRANEAQ AGDDIDRIYL IIEYPLKGSF
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