| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0212 |
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| Symbol | |
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| ID | 6108991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 220576 |
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| End bp | 221466 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641619968 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001747087 |
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| Protein GI | 170719399 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0028482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.250883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC GCCTGGTGCC TTCCATGACC GCCCTGCAGT GCTTCGAAGC TGCAGCCCGC
CACCTGAGCT TCACCCGTGC CGCCGAAGAG CTGCACCTGA CCCAGAGCGC GGTCAGCAAG
CAGGTCGCAC AGCTCGAAGA GATGCTGCGC CACCACCTGT TCCTGCGTAT CCGCCGGCGC
TTGCAATTGA CCCCCGCCGG CAGCCTGTAC CTGGCCGAGG TCAACAAGAT TCTCACGCAG
GTGGACATGT CCAGCCGCTA TGTCCTGACC TATGGCGAGC AGACCGAGAT ATTGAAGGTA
GCCACTCAAC CGAGTTTTGG CGTGCGCTGG TTGATCCCGC ACCTCAAGGG CTTCGGCAAG
CGCCACACGA ACATCCACCT GGACATCCGT AACGAGATGG AGCCGTTTGC CTTGCTGCAG
GGCTCGGCGG ATGTGGTGTT TTTCTATGGG CAAGGCACCT GGCCGGGGGC GACCTGCGTG
GAGCTGTTCC GTGAGGAAGT GGTGCCGGTG TGTGCGCCGG AGCTGCTGGC CGGGCGCACG
CTGGGCGATG CTGCAGAACT GGCCGACCTG GTGCTGCTGC AAAGCACGTC GCGGCCGGAG
GCCTGGCATG AGTGGTTCTT GGAGCTGGGT TTGCAGAGCG TCAGCGCCTA TCACGGGCCG
CGCTTCGATA CGTTCTATAT GGCGTTGAGC GCAGCGCAGG CCGGGTGCGG GGTGGCGCTG
GTGCCACGCT ATCTGGCGGC GAAGGAATTG AGCGAGGGTA GCCTGGTCAT TCCTTGGAAT
CATGCGATGA ACAGTGCCGG GGCGCATTAC CTGGCGTATG CCGAGCATGC GGCGGAGGTG
CCCAAGGTGC GGGCATTGGT GGAATGGATT CATGAGCAGC TTCAGGCTTG A
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| Protein sequence | MSKRLVPSMT ALQCFEAAAR HLSFTRAAEE LHLTQSAVSK QVAQLEEMLR HHLFLRIRRR
LQLTPAGSLY LAEVNKILTQ VDMSSRYVLT YGEQTEILKV ATQPSFGVRW LIPHLKGFGK
RHTNIHLDIR NEMEPFALLQ GSADVVFFYG QGTWPGATCV ELFREEVVPV CAPELLAGRT
LGDAAELADL VLLQSTSRPE AWHEWFLELG LQSVSAYHGP RFDTFYMALS AAQAGCGVAL
VPRYLAAKEL SEGSLVIPWN HAMNSAGAHY LAYAEHAAEV PKVRALVEWI HEQLQA
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