Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0172 |
Symbol | rpoZ |
ID | 6108951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 177320 |
End bp | 177583 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641619928 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_001747047 |
Protein GI | 170719359 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.840834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0041623 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCGCG TAACTGTTGA AGACTGCCTG GAACACGTGG ATAACCGTTT TGAGCTGGTC ATGCTCTCGA CCAAGCGCGC CCGTCAGCTG GCTACCGGCG GCAAAGAGCC ACGCGTAGCG TGGGAAAACG ACAAGCCAAC CGTCGTTGCC CTGCGTGAAA TCGCAGAAGG CATCGTCACC AACGAATTCA TTGCCGCTGA AGAGATCGTC ACCGAGGATC CGGTCTTCGC CGCGTTCGAG GACGAGTCCA ACGAGGCTGT CTGA
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Protein sequence | MARVTVEDCL EHVDNRFELV MLSTKRARQL ATGGKEPRVA WENDKPTVVA LREIAEGIVT NEFIAAEEIV TEDPVFAAFE DESNEAV
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