| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0106 |
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| Symbol | |
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| ID | 6109276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 111729 |
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| End bp | 112733 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619862 |
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| Product | luciferase family protein |
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| Protein accession | YP_001746981 |
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| Protein GI | 170719293 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0045714 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAGC TGCGTGACCT GAAAATTTCC ACCCTCGACC TGGTGCCGGT ACGGGCCGAC
TCTGGCCCGG CGCAAGCGTT GCGCAATTCG CTGGACCTGG CCCAGCATGT CGAGCGCTTT
GGCTACAACC GCTTCTGGGT TGCCGAACAC CACAACATGG ACGGCATCGC CAGCTCCGCG
ACCTCGGTGC TGATCGGTTA CCTGGCGGGG GGTACTTCAA CCATCCGTGT CGGCTCCGGT
GGCGTCATGC TGCCCAACCA TGCCCCCTTG GTGATCGCCG AGCAGTTCGG CACGTTAGCC
AGCCTTTATC CAGGGCGTAT CGATCTGGGC CTGGGCCGTG CGCCGGGCTC CGACCAAATG
ACCGCACGCG CCCTGCGCCG AGAGCGTTCG GGCAGCGCCG ATGATTTCCC GGACGATGTC
GAAGAATTGT CGCGCTACCT TGGCCCGCGC ACAGATGATC AAAAAGTGAT CGCCGTACCT
GGCCACGACA CCGAGGTGCC GATGTGGCTG CTCGGCTCCA GCCTGTTCAG CGCACAGCTG
GCCGGCATGC GCGGCATGCC CTACGCCTTC GCCTCGCACT TCGCGCCGCG CTACATGCAT
GAGGCGATCC GTATCTACCG CGACCATTTC AAGCCGTCTA CCACGCTCGA CAAGCCTTAC
GTGATGCTGG GCATTCCGAT GGTGGTGGCC GAAACCGACG ACAAAGCCGA GTTCCTGGCC
ACTTCGGTGT ACCAGCGTAT TCTTGCCCTG ATACGCGGGC AGAGCCTTAT GCAACGCAAG
CCGGTACCGA GCATGGATGG GCTGTGGCTG CCACATGAGC GCGATGCGGT GGGTAGCTTC
CTGGGCCTGG CGATGATCGG CAACCCGCAG AAGGTGAAGG CCAAGGTCGA GGTGCTACTG
GAGCAGACCG GGGCGGACGA GCTGATCTTT ACCTGCGACC TGTATGAGCA TGAGGACCGG
ATCAGGTCGT ATGAGTTGTT GGCGCAAGCC TTGAAATCGG AGTAG
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| Protein sequence | MTQLRDLKIS TLDLVPVRAD SGPAQALRNS LDLAQHVERF GYNRFWVAEH HNMDGIASSA
TSVLIGYLAG GTSTIRVGSG GVMLPNHAPL VIAEQFGTLA SLYPGRIDLG LGRAPGSDQM
TARALRRERS GSADDFPDDV EELSRYLGPR TDDQKVIAVP GHDTEVPMWL LGSSLFSAQL
AGMRGMPYAF ASHFAPRYMH EAIRIYRDHF KPSTTLDKPY VMLGIPMVVA ETDDKAEFLA
TSVYQRILAL IRGQSLMQRK PVPSMDGLWL PHERDAVGSF LGLAMIGNPQ KVKAKVEVLL
EQTGADELIF TCDLYEHEDR IRSYELLAQA LKSE
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