Gene PputW619_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0099 
Symbol 
ID6109269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp107210 
End bp107542 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID641619855 
ProductDOPA 45-dioxygenase 
Protein accessionYP_001746974 
Protein GI170719286 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000561986 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGAGGA TCAAGGGCTA TCACGCCCAC GTTTATTACG ACGCATCGAC TATCGAGCAA 
GCGCGTGAGC TGTGCGAGGA GGCGGCGCGG CTGTTCCCCG TGACCATGGG GCGCATGCAC
GAGAAGCCGG TCGGGCCGCA CCCGGACTGG AGCTGCCAGC TGGCGTTCGG GCCGGAGGTG
TTGGGCGTGG TGTTGCCGTG GTTGGCGTTG TATCGCAAGG GGTTGGTGGT GTTTCTGCAC
CCGCTGACCG GGGATGAGCT GGCGGATCAC CGCGATCATG CGATCTGGAT GGGGGCTTTG
CGGCCTTTGA AGTTGTCGGT TTTTGGCGGT TAG
 
Protein sequence
MQRIKGYHAH VYYDASTIEQ ARELCEEAAR LFPVTMGRMH EKPVGPHPDW SCQLAFGPEV 
LGVVLPWLAL YRKGLVVFLH PLTGDELADH RDHAIWMGAL RPLKLSVFGG