| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0093 |
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| Symbol | aroE |
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| ID | 6109263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 100415 |
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| End bp | 101239 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619849 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001746968 |
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| Protein GI | 170719280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.275997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000233392 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCAGT ACGTCGTATT TGGTAATCCG ATCGGCCACA GCAAGTCGCC GTTGATTCAC
CGCCTGTTCG CCGAACAGAC CGGCCAGGAC TTGGAGTACG CCACCCTGCT GGCGCCGCTA
GACGAGTTCA GTGACTGCGC CCGGGGCTTT TTCAAGCAAG GCCGTGGCGC CAACGTGACC
GTGCCATTCA AGGAAGAGGC CTACCGCCTG TGTGACAGCC TCACCCCGCG CGCCCAACGG
GCCGGGGCGG TGAACACCTT GAGCAAGCTG GCCGATGGCT CGCTGCGGGG CGATAACACT
GATGGCGCCG GCCTGGTGCG CGACCTTACA GTGAATGCCG GGGTTGAACT GACTGGCAAA
CGTATTCTGA TCCTTGGCGC CGGCGGCGCA GTGCGCGGCG TGCTGGAGCC GATCCTGGCG
CATGACCCTC AGTCCTTGGT AATTGCCAAC CGCACACTGG AAAAGGCCGA GCAGCTGGCA
CGCGAGTTCG ATGAGATGGG GCCGGTGATG GCTAGCGGTT TCGCCTGGCT GCAGGAGCCG
GTGGACGTGA TCATCAACGC CACGTCGGCG AGCCTGTCCG GCGAGCTGCC GCCGATTGCC
GACAGCCTGG TCGAGGCCGG GCGCACCGTG TGCTACGACA TGATGTATGG CAAGGAGCCG
ACGCCATTCT GCCAGTGGGC CAGCAAGCTG GGGGCGGCCA AGGTGCTGGA TGGGCTGGGC
ATGTTGGCAG AGCAGGCGGC GGAGGCGTTC TTCATCTGGC GTGGGGTACG TCCGGAAACG
GCGCCGGTGC TGGCTGAGTT GCGCCGGCAG CTCGCTCGGG GCTGA
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| Protein sequence | MDQYVVFGNP IGHSKSPLIH RLFAEQTGQD LEYATLLAPL DEFSDCARGF FKQGRGANVT
VPFKEEAYRL CDSLTPRAQR AGAVNTLSKL ADGSLRGDNT DGAGLVRDLT VNAGVELTGK
RILILGAGGA VRGVLEPILA HDPQSLVIAN RTLEKAEQLA REFDEMGPVM ASGFAWLQEP
VDVIINATSA SLSGELPPIA DSLVEAGRTV CYDMMYGKEP TPFCQWASKL GAAKVLDGLG
MLAEQAAEAF FIWRGVRPET APVLAELRRQ LARG
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