| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0074 |
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| Symbol | |
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| ID | 6109244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 80558 |
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| End bp | 81445 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619830 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001746949 |
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| Protein GI | 170719261 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.183793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000265009 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACT GGAATGATCT GCGGTTTTTC CTCGAGTTGC AGCGCAGTGG CCGCCTGCTC
AGTGCTGCCA AGCGTCTCAA CACGACCCAT AGCACGGTTG CCCGGCATAT CGAGAGCATC
GAGAAAAGCC TGGGCACCCC ACTGTTCGTG CAACACGCGC AGGGCTACGA ATTGACGCCC
TCCGGCCAGG CGCTGCTCAA GCACGCCGAA GCCATGGAGA ACGTCGCGTT GCTGGCGCAG
GAAGAAATCA CCCAGGCCAT CACACCGCTG GGCAAGATTC GCCTTGGGGT CACCGAAGGC
ATCGGCATCA TGTTCTTCAC CCCACGCATG AATGCGCTGT TCGATCGGTA TCCGGGCCTG
GAAGTGGAGC TGGTGGCCGT GCCTCGCTTT GTCAGCATCC TCAACCGCGA GGCGGAAATC
AGCATTCACC TGGAGCGTCC CAGTGCCGAC CTGCTGATTA CCCGCAAACT CACCGACTAC
CGCCTGGCCC TGTATGCCAG CCAGGCTTAC CTGGACCGCG CGCCACCTCT ACGCAACCGT
GAAGATCTGG CCCGACACAG CTGGATCGGC TACGTCGACG ACCTGTTGTT CAGCCAGGAG
CTGCTGTTTC TAAACAGCTT CTGCCGGGCG CCCAATGTGG CCTTTCGCAG CACCAGCGTG
ATCGCCCAGC AAACTGCTGC GCGCGCCGGC CTGGGCATCG CCGTGCTGCC CAACTACATG
GCTCGCCACG ACCCGACACT GGTACGCATA CTGCCCAGCG AAACCATCCA GCGCAGCTAC
TGGATATGCA CCCGTCGTGA ATTGCACAAG TCGGTACGCC TGCGGGTGGT CTGGGACTAC
CTGCTGGCGC TGTGCGCGCA GGAACAGGCC GAGCTGCTAG CCGAGTAG
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| Protein sequence | MFDWNDLRFF LELQRSGRLL SAAKRLNTTH STVARHIESI EKSLGTPLFV QHAQGYELTP
SGQALLKHAE AMENVALLAQ EEITQAITPL GKIRLGVTEG IGIMFFTPRM NALFDRYPGL
EVELVAVPRF VSILNREAEI SIHLERPSAD LLITRKLTDY RLALYASQAY LDRAPPLRNR
EDLARHSWIG YVDDLLFSQE LLFLNSFCRA PNVAFRSTSV IAQQTAARAG LGIAVLPNYM
ARHDPTLVRI LPSETIQRSY WICTRRELHK SVRLRVVWDY LLALCAQEQA ELLAE
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