Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0062 |
Symbol | |
ID | 6109232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 67410 |
End bp | 68681 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641619818 |
Product | outer membrane efflux protein |
Protein accession | YP_001746937 |
Protein GI | 170719249 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000405972 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCCCGGT ATAACCGCAA TGTCTTACCC AAGACCCCCG TCTCGCCCTG GAAGATCGCT GCACTCTGTG CAGTCATCTC TGGGTTGATG GCGCCTGCAG CCCTTGCCCA AAGCATCAGC TTGCCCCAGG CGCTTTCGAC GGCCATGGAT GCCAACCCAG ACCTGGCCGC GGCCAGGCAA GAAATTGGGA TCGCTGATGG TGCTCGCAAG CAGGCCGGGC TTATCCCCAA CCCCACAATC TCGTATGACG TGGAAGACAC CCGTCGTAAC ACCAGCCAGA CGACTGTCTC TCTCAGCCAG ACCCTTGAGC TGGGCGGTAA GCGGGGGGCT CGTGTTGACG TCGCCACATA CGGGCAGACC GCCGCACAGC TTGAGTTAGA CCGTCGCGTT AACGGCCTGC GTGCAGATGT CGTCCAAGCC TTTTACGCCG CGTTGCGGGC CCAGACAGGT CTCGACCTGG CCAAGCAATC TCTCGAACTG ACTGAGCGCG GTCTTCGCAT CGTCGATGGC CGTGTTCGCG CAGGTAAGTC GTCCCCAGTG GAGGCGACCC GCGCTCAAGT GCAACTGGCC GAAGCCCAGC TGCAAGTTCG ACGTGCAGAA ACGGAAAAAG CGACCGCTTA CCAACAGCTC GCTCAAATTA CCGGGAGCTC AGTCACCGTG TTTGATCGAC TCGAATCGCC AACCCTCTCC CCGGGCTTGC CACCTCGCAC TGAAGATCTG CTGGCTAAGC TCGACCAAAC AGCAGAAATG CGTCAGGCCG TGGTGCAGAT AGACAAGAGC GATGCCTCGC TCGGCTCAGA GAAAGCTCAG CGTATCCCGA ACCTTACTGT CAGTGTAGGT AGCCAGTACG ACCGCTCTGT GCGCGAGCGG GTCAACACTG TGGGCCTGTC TATGCCTTTG CCGCTGTTCG ATCGTAACCA GGGCAACATT CTTTCCGCTT CTCGTCGTGC AGATCAGGCC CGGGACCAGC GCAATGCTGT TGAGCTGCGC CTGCGCACCG AAACCCAAAC CGCGTTGAAC CAATGGTCCA CCGCCATGCA GGAGGTCGAG TCCTACGACA AGACCATTCT GCCTTCAGCC CAACAAGCCG TAGAGACCGC AACCCGCGGC TTCGAGATGG GCAAATTCGG TTTCATCGAA GTGCTGGATG CCCAGCGCAC CTTGATCGTC GCTCGTGGCC AATACCTCGA ATCGTTGGCA GCGGCGACCA ATGCGCGTGC GCAGGTGGAA AGGGTTTATG GCGAAGTCGG CTCAACCGCC GGCACTCGCT GA
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Protein sequence | MPRYNRNVLP KTPVSPWKIA ALCAVISGLM APAALAQSIS LPQALSTAMD ANPDLAAARQ EIGIADGARK QAGLIPNPTI SYDVEDTRRN TSQTTVSLSQ TLELGGKRGA RVDVATYGQT AAQLELDRRV NGLRADVVQA FYAALRAQTG LDLAKQSLEL TERGLRIVDG RVRAGKSSPV EATRAQVQLA EAQLQVRRAE TEKATAYQQL AQITGSSVTV FDRLESPTLS PGLPPRTEDL LAKLDQTAEM RQAVVQIDKS DASLGSEKAQ RIPNLTVSVG SQYDRSVRER VNTVGLSMPL PLFDRNQGNI LSASRRADQA RDQRNAVELR LRTETQTALN QWSTAMQEVE SYDKTILPSA QQAVETATRG FEMGKFGFIE VLDAQRTLIV ARGQYLESLA AATNARAQVE RVYGEVGSTA GTR
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