Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0006 |
Symbol | |
ID | 6109176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 8066 |
End bp | 10024 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619762 |
Product | integrase catalytic region |
Protein accession | YP_001746881 |
Protein GI | 170719193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.418357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCT TTTCCCTTAG GGTGAAATTG GTCGTCATCG TTCGTGGCGT ACTGATGGTG CTTGAGAAGA GGCTTATTGA CCGGAAGCTG CTCTTTTTCG ATGAGCTTGG TGAGCCCACG AAGCTATCCG AGAAGGAGTT CTATGAGGCC TACGAGAAGC GCGAGATCGA GATCTCCGCT GATCAGCCAT ACCTTGGGAG GGTTCCGTAT GTGCGGAACG TCCCTCCAGA TATTTCATGC TTCCCCAAAA AACATGGAGA TGAGGCATTG CGTCGACGCA AGTATCTGGA CGACCTAACT AAGCGCGGTA AATACAAGCT ACCGGGTGAC GAAGACATGA TCAAGAAGCT TAGAGATATC GCCAAAAAGA TTGGGGATGC GTGCGCACCC TCGGTTTCCA CTATTCGACG TTGGGCAGCC AAATACATTG GCCAGAACGT AGTAAAGCTT ATCCCTCAGC ATGCCAAAAA GGGTCGGGCT GCCGCGATAC AGGGAGAGCT CGAAGTTATT CTTGAAGGGG TGATTAATAA AACCTACCTG CAGGATACGA TTCCAGCGGT CAGCGTGGTC GTTTCAGAAT TCGAGGATCA GATAAAAGAG AGGAACAAAA GTCGTTTGCC TTCGGATCAG CTCAAGATCC CAAGCGGAAT GACTGTCCGA AGGTACATCG CCAAGCTGGA TCCGTACCTT GTGGATAAGG AGAGGCTCGG AAAACACGCA GCAGACAAGA AGCACCGTGT TGCGGCGGGT GTCCTACGTG TCCATGAGAT TTTGGAACGT TGGGAAATTG ATCACACCTT GTTGGACGTC CAGCTTGTGG ATGAAACCTC GGGGCTGTGC ATTGGGCGCC CCTATCTGAC GATCGTCCTC GACCGCTTCT CTCGAATGGT GATGGGATAT TTGCTCCACC TGTCGGCGCC AAATACGGAA ACCGTGCTTC GTGTGATCGA ACGCTCAATC CGTCCAAAAG CCGAATTGCT GAAGCGCTTT CCGAAAGTGA GAAATGAATG GTGGGCACGT GGGCTGCCGG CTCGAATAGT CCCAGACAAC GCAGCGGAAT TTCACGCGGG CGATCTCATC ATGGGATTCA ACGAGTTGGG TATCGAGATC ATGTATCCCG CTTCAAGGGC CCCTCAAAGG AAAGGTGCCG TCGAACGCTT TTTCAGCACA CAGAACCTGG GGCTTATCCA CAACCTCCCG GGTACCACCT TCTCGAATAT CCAGCAGCGT GGCGATTACG ACTCGGAGAA GAATGCATGT TTCACGCTCC CTCAATTGGA GGCGGTGGTA GTGAAATGGA TCGTCGATGG TTACCACCAG ACTCCTCATC GGGGGCTGGA CAACAGAACA CCGGCTCAAG TCTGGGGGAC TAGCGAGGCG AACCATGTCA TCAGCCTTCC CGTCGACCTG GACTCGTTGG AGTGCATTCT GGCCAAGCGG GCCTCGGTGA AGGTTCACCA TTACGGCATC GAGGTTGCCA AAGTGGGCTA CCACTCTACG GAACTTGCTG AGCTCCGTAT GCGTTTGGCA GACGGAGAAA AGGTAAACGT CCGCTATCGA GACGAAGCCG GGCACGTTTG GGTTCACGAC CGCTTCAGAA ACTTGTTCTT CAAAGTGCCC GCCAAAGATG AGCGAATGGC CGGTAAGAGC AGGGAGGTGT GGAAGGCTGC CGAGAAAGCG CTGCGAGAAA AATATAATGA GCAGCCTAGC TTCGAGGCTA CGCACAGGTG CTACCAGGAA ATTATGGAAG ATGCAGACGA GGCCCGCCGT TCGCAGACGC TCAGAAAACG ACGCGCAGCT GCCATAGCGA AAATCGACAA GGAGGGTCGA GTGACCGAAA GCACGCCTCC ACCCAAGGTA CTCGCTGAAG TGGAATGGAC CGGTGACTCT ATTCCTAACA TTCCGCCAGC AGCCTTCAAG GTCTCGGTTC GTCGCCCTGC TGGGAGTTCT AAGCCATGA
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Protein sequence | MQTFSLRVKL VVIVRGVLMV LEKRLIDRKL LFFDELGEPT KLSEKEFYEA YEKREIEISA DQPYLGRVPY VRNVPPDISC FPKKHGDEAL RRRKYLDDLT KRGKYKLPGD EDMIKKLRDI AKKIGDACAP SVSTIRRWAA KYIGQNVVKL IPQHAKKGRA AAIQGELEVI LEGVINKTYL QDTIPAVSVV VSEFEDQIKE RNKSRLPSDQ LKIPSGMTVR RYIAKLDPYL VDKERLGKHA ADKKHRVAAG VLRVHEILER WEIDHTLLDV QLVDETSGLC IGRPYLTIVL DRFSRMVMGY LLHLSAPNTE TVLRVIERSI RPKAELLKRF PKVRNEWWAR GLPARIVPDN AAEFHAGDLI MGFNELGIEI MYPASRAPQR KGAVERFFST QNLGLIHNLP GTTFSNIQQR GDYDSEKNAC FTLPQLEAVV VKWIVDGYHQ TPHRGLDNRT PAQVWGTSEA NHVISLPVDL DSLECILAKR ASVKVHHYGI EVAKVGYHST ELAELRMRLA DGEKVNVRYR DEAGHVWVHD RFRNLFFKVP AKDERMAGKS REVWKAAEKA LREKYNEQPS FEATHRCYQE IMEDADEARR SQTLRKRRAA AIAKIDKEGR VTESTPPPKV LAEVEWTGDS IPNIPPAAFK VSVRRPAGSS KP
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