| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0004 |
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| Symbol | gyrB |
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| ID | 6109174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4189 |
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| End bp | 6609 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619760 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001746879 |
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| Protein GI | 170719191 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.727488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA ATCAAACGTA CGACTCTTCA AGCATCAAGG TGCTGAAAGG TTTGGATGCC
GTGCGCAAGC GTCCCGGCAT GTACATTGGC GACACCGATG ACGGTAGCGG CCTGCACCAC
ATGGTCTTCG AAGTGGTCGA CAACTCGATC GACGAAGCCC TCGCCGGGCA CTGCGATGAC
ATCACCGTCA TTATCCACAC GGATGAATCC ATCAGTGTGC GCGACAACGG TCGCGGCATT
CCGGTCGACG TGCATAAAGA AGAAGGCGTT TCTGCGGCTG AGGTCATCAT GACCGTACTG
CACGCGGGCG GTAAATTTGA TGATAACTCC TACAAAGTTT CCGGCGGTCT GCACGGTGTA
GGTGTTTCGG TAGTAAACGC CCTTTCGGAA AAGCTGGTGC TTACCGTTCG CCGTAGCGGC
AAGATCTGGG AGCAGACCTA CGTTCATGGT GTTCCACAGG CGCCGATGGC CGTTGTGGGC
GAAAGCGAAA CCACCGGTAC CCATATTCAT TTCAAGCCTT CGGCTGAGAC CTTCAAGAAT
ATTCACTTCA GCTGGGACAT CCTGGCCAAG CGTATTCGTG AACTGTCCTT CCTGAACTCT
GGCGTCGGCA TTCTGCTGAA AGACGAGCGC TCGGGCAAAG AAGAGTTCTT CAAATATGAA
GGCGGCCTGC GTGCATTCGT TGAATACCTG AACACCAACA AGACTCCGGT CAACTCCCAG
GTGTTCCATT TCAACGTTCA GCGTGAAGAT GGCGTGGGTG TTGAAGTTGC CCTGCAGTGG
AACGACAGCT TCAACGAAAA CCTGCTGTGC TTCACCAACA ACATTCCGCA GCGCGATGGC
GGTACCCACC TGGTTGGTTT CCGCTCTTCG CTGACCCGTA GCCTGAACAG CTACATCGAG
CAGGAAGGCC TGGCCAAGAA GAACAAGGTT TCCACCACCG GTGACGATGC TCGTGAAGGC
CTGACCGCGA TCATTTCGGT CAAGGTGCCG GATCCGAAGT TCAGTTCGCA GACCAAGGAC
AAGCTGGTTT CCTCGGAGGT GAAAACCGCC GTGGAACAGG AGATGAACAA GTACTTCGCC
GACTTCCTGT TGGAAAACCC CAACGAAGCC AAAGCGGTAG TCGGCAAGAT GATCGACGCT
GCCCGTGCCC GTGAAGCGGC GCGCAAAGCG CGTGAAATGA CTCGCCGTAA AGGCGCGCTA
GATATCGCGG GCTTGCCGGG CAAACTGGCG GACTGCCAGG AGAAGGACCC TGCTCTTTCC
GAACTGTACC TGGTGGAGGG TGACTCCGCA GGTGGCTCGG CCAAGCAAGG TCGTAACCGT
CGTACCCAGG CGATCCTGCC GCTGAAGGGC AAGATTCTCA ACGTCGAGAA AGCACGTTTC
GACAAGATGA TCTCTTCCCA GGAAGTGGGC ACACTGATCA CCGCGCTGGG CTGTGGCATC
GGCCGCGAAG AGTACAACAT CGACAAGCTG CGCTATCACA ACATCATCAT CATGACCGAT
GCTGACGTTG ATGGTTCGCA CATCCGTACC CTGCTGCTGA CCTTCTTCTT CCGTCAGCTG
CCAGAGCTGG TCGAGCGTGG CTACATCTAC ATTGCCCAGC CACCGCTGTA CAAGGTGAAG
AAAGGCAAAC AGGAGCAGTA CATCAAGGAC GACGAGGCCA TGGAAGAATA CATGACCCAG
TCGGCCCTCG AAGATGCCAG CCTGCACCTG GATGAGTCTG CGCCAGCCGT TTCCGGCGTT
CAGCTGGAGG TTTTGGTCAA CGAGTTCCGC GGTGTGATGA AGACCCTCAA GCGCTTGTCT
CGCTTGTACC CGGAAGAGTT GACCGAGCAC TTCATCTACC TGCCGGAAGT TACCCTGGAG
CAATTGGGCG ACCATGCCGT CATGGAGAAC TGGTTGGCCA AACTGCAGGA GCGCCTGAGC
AACAGCCAGA AGTCTGGCCT GATGTACAAG GCCACTCTGC GCGAGGACAA AGAGCGCAAT
GTGTGGCTGC CTGAAGTGGA AATCACCTCG CACGGCCTGG CCAGCTACAT CACCTTCAAC
CGCGATTTCT TCGGCAGCAA CGACTATCGC ACGGTGGTCA ACATTGGCTC CAAGTTGGCG
AGCCTGCTGG GCGAAGGTGC TTACGTACAG CGTGGTGAAC GTCGCAAGGC GATCGTCGAG
TTCAAGGAAG GCCTGGATTG GCTGATGAAC GAGACCACCA AGCGTCACAC CATCCAGCGA
TACAAAGGGC TGGGTGAGAT GAACCCGGAC CAGTTGTGGG AAACCACCAT GGACCCAACT
GTACGACGCA TGCTCAAGGT CACCATCGAA GACGCCATTG CCGCCGATCA GATCTTCAAC
ACCTTGATGG GGGATGCGGT TGAACCTCGC CGTGACTTTA TCGAAAGCAA CGCGCTGTCG
GTTTCTAACC TGGACTTCTG A
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| Protein sequence | MSENQTYDSS SIKVLKGLDA VRKRPGMYIG DTDDGSGLHH MVFEVVDNSI DEALAGHCDD
ITVIIHTDES ISVRDNGRGI PVDVHKEEGV SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV
GVSVVNALSE KLVLTVRRSG KIWEQTYVHG VPQAPMAVVG ESETTGTHIH FKPSAETFKN
IHFSWDILAK RIRELSFLNS GVGILLKDER SGKEEFFKYE GGLRAFVEYL NTNKTPVNSQ
VFHFNVQRED GVGVEVALQW NDSFNENLLC FTNNIPQRDG GTHLVGFRSS LTRSLNSYIE
QEGLAKKNKV STTGDDAREG LTAIISVKVP DPKFSSQTKD KLVSSEVKTA VEQEMNKYFA
DFLLENPNEA KAVVGKMIDA ARAREAARKA REMTRRKGAL DIAGLPGKLA DCQEKDPALS
ELYLVEGDSA GGSAKQGRNR RTQAILPLKG KILNVEKARF DKMISSQEVG TLITALGCGI
GREEYNIDKL RYHNIIIMTD ADVDGSHIRT LLLTFFFRQL PELVERGYIY IAQPPLYKVK
KGKQEQYIKD DEAMEEYMTQ SALEDASLHL DESAPAVSGV QLEVLVNEFR GVMKTLKRLS
RLYPEELTEH FIYLPEVTLE QLGDHAVMEN WLAKLQERLS NSQKSGLMYK ATLREDKERN
VWLPEVEITS HGLASYITFN RDFFGSNDYR TVVNIGSKLA SLLGEGAYVQ RGERRKAIVE
FKEGLDWLMN ETTKRHTIQR YKGLGEMNPD QLWETTMDPT VRRMLKVTIE DAIAADQIFN
TLMGDAVEPR RDFIESNALS VSNLDF
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