| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5397 |
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| Symbol | |
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| ID | 5873212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 6025866 |
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| End bp | 6026828 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550533 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001671614 |
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| Protein GI | 167036383 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.547943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.012277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT CCTTGATGCG TATGACTTTG CGTCAATTGC AGATCTTCAA TGAGGTGTGT
GATTTACGTT CTTACAGCCG TGCGGCGGAA GAGATGTCGC TGACGCAACC CGCCGTTAGT
CTACAGATCC GCCAGCTTGA AGAGCTGATC GGCCAGCCGC TGTTCGAGTA TGTGGGCAAG
AAGCTCTACC TCACCGAGGC GGCCGAAGCG TTGCAACGCG CCAGCCACGA CATTTTCGGG
CGCCTGGAGA GCCTGGACAT GCAGCTGTCG GACATGCAGG GCTCATTGCA GGGTCAGTTG
AAGCTGGCGA TCGAGTCCAG TGCCAAGTAC TTCGTGCCAC ACCTGTTCGC CGCCTTCAAG
CAGCGTCACC CGGAGGTCAA CCTGACCCTG ACAGTGGTCA ACCGCGCCCA GGCCATTCGC
CGTCTTTCCG ACAACCGCGA CGACCTGATC ATCATGTCGA TGGTGCCGCA GGACATGGGT
CTGGAGTTTC TGCCATTCCT CAACAACCCG ATCGTTGCCG TGGCGCCGCC CGAGCACCCG
CTGTGCAAGC TCGAACAGCT GCGCCTGCAG GACCTGGAGC CTCATACCCT GTTGGTCCGT
GAGCAAGGTT CAGGGACGCG CAAGGCTTGC GAAGAGTACT TCAAGGACAA ACGCGTGCAC
TTCACCCAGA CCCTGGAGGT TGCATCGGCC GATGCCCAGC GCGAATGCGT GATCGCCGGC
CTTGGGATCG CCCTGCTCAC CCGCCACGCA GTCAACCTGG AACTGGCCAC CGGGGTGCTG
AAGGAATTAC CGGTGGAGGA ACTGCCGCTG TACCGCAGCT GGTGCGTGGT GCAGTCCAAG
GCCAAGCGAC AGTCGCCGGT GGCCTTGGCC TTTCTGGCAT TCATCCGCGG CGAACGTGCG
TTGATCAGCG CGCTTGTTGA GCGTTTTTCG GGGAAGTTGC CGCCGACGCC TGCCACACCG
TGA
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| Protein sequence | MRKSLMRMTL RQLQIFNEVC DLRSYSRAAE EMSLTQPAVS LQIRQLEELI GQPLFEYVGK
KLYLTEAAEA LQRASHDIFG RLESLDMQLS DMQGSLQGQL KLAIESSAKY FVPHLFAAFK
QRHPEVNLTL TVVNRAQAIR RLSDNRDDLI IMSMVPQDMG LEFLPFLNNP IVAVAPPEHP
LCKLEQLRLQ DLEPHTLLVR EQGSGTRKAC EEYFKDKRVH FTQTLEVASA DAQRECVIAG
LGIALLTRHA VNLELATGVL KELPVEELPL YRSWCVVQSK AKRQSPVALA FLAFIRGERA
LISALVERFS GKLPPTPATP
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