| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5365 |
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| Symbol | ubiA |
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| ID | 5873180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5988294 |
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| End bp | 5989184 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550501 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001671582 |
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| Protein GI | 167036351 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.346697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCTGC AACTGCTCAA GTCGCTCAAC CGCCTGCACC CGCGGGCCTG GGACTTTGTC
CAGCTCAGCC GCATGGACCG CCCGATCGGC ATCTACCTGC TGCTATGGCC GACGCTGTCG
GCAGTGTGGA TTGCCGGCAA CGGTTCACCG ACCCTGGCCA ATGTGCTGAT CTTCGGCCTT
GGCGTGGTGC TGATGCGCGC GGCCGGCTGC TGCATCAACG ACTTCGCTGA CCGCAAGGTG
GATGGCCACG TCAAGCGCAC CGCCGACCGC CCCCTGGCCA GTGGCCGCGT GCGGCCACGC
GAGGCGCTGG CACTGTTTGC GATGCTGGTC GGGGTGAGTT TCCTGCTGGT GCTGTGCACC
AACAGCCGCA CGGTCTGGCT GTCGTTCGGC GCGGTGGCGT TGGCGTTCTG CTACCCGTTC
ATGAAGCGCT ACACCTACTA CCCACAGGTG GTGCTGGGGG CGGCGTACTC CTGGGGTATT
CCCATGGCTT TCACCGCCGC AGGTGGCGAA TTGCCGGCCA GCGCCTGGCT GCTGTACATC
GCCAACTTGT TGTGGACGGT GGGTTACGAC ACCTACTACG CCATGGTCGA CCGCGATGAC
GACCTGAAGA TTGGCGTGAA GTCCACGGCG ATTCTGTTCG GTGACGCGGA CCGCAACATC
ATCCTGACCT TGCAGTTGCT GTCGCTGGGG TGCTTGTTGT TGGCGGGTAG CCGCTTTGAC
CTGGGGGGCT GGTTCCACCT GGGGCTGCTG GGCGCTGCGG CGTGCTTTGC CTGGGAATAC
TGGTCGACAC GCAAGCTGGA CCGGGAGTCG TGCTTCAAGG CGTTTCTGCA CAATCACTGG
GCGGGGTTGC TGGTGTTCAT TGGGGTAGTG CTGGATTACG CGTTTCGCTG A
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| Protein sequence | MYLQLLKSLN RLHPRAWDFV QLSRMDRPIG IYLLLWPTLS AVWIAGNGSP TLANVLIFGL
GVVLMRAAGC CINDFADRKV DGHVKRTADR PLASGRVRPR EALALFAMLV GVSFLLVLCT
NSRTVWLSFG AVALAFCYPF MKRYTYYPQV VLGAAYSWGI PMAFTAAGGE LPASAWLLYI
ANLLWTVGYD TYYAMVDRDD DLKIGVKSTA ILFGDADRNI ILTLQLLSLG CLLLAGSRFD
LGGWFHLGLL GAAACFAWEY WSTRKLDRES CFKAFLHNHW AGLLVFIGVV LDYAFR
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