Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5358 |
Symbol | |
ID | 5873173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5981622 |
End bp | 5983700 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550494 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_001671575 |
Protein GI | 167036344 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.419369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.636559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGC TGTCGAAAGT CCCGGTCACG GTACTGAAAG GTGTTGGTGA GGCCATGGCG GAAAAGCTCG CCAAGGTCGG CCTGGAAAAC CTGCAGGACG TGCTGTTCCA CCTACCCCTG CGCTACCAGG ACCGCACCCG AGTGGTACCG ATTGGCCAAC TGCGCCCCGG CCAGGATGCG GTGATCGAGG GGGTGGTCAG TGGTAGCGAC GTGACCATGG GCAAGCGCCG CAGCCTGGTG GTGCGCCTGG GTGATGGCAG CGGCGTGCTG ACACTGCGCT TCTACCACTT CAGCAACGCG CAGAAGGAGG GCCTGAAGCG CGGCACTCAC CTGCGCTGCT ACGGCGAAGC CCGCCCCGGC GCTTCGGGCC TGGAAATCTA CCACCCAGAG TACCGCGCAC TGAACGGCGA CGAGCCGCCG CCACCGGTCG AGCAGACCCT GACGCCGATC TACCCCTCCA CCGAAGGCCT TACCCAGCAA CGCCTGCGCC TGTTGTGCCA ACAGAGCCTT GGCCTGCTCG GCCCACGCAG CCTGCCCGAC TGGTTGCCGG ACGAACTGGC GCGGGACTAC CAGCTGGCGC CGCTGGACGA AGCCATTCGC TACCTGCACA ACCCACCGGC CGACGCCGAC CTCGACGAGC TTGCCGAAGG CCAGCACTGG GCCCAGCACC GCCTGGCCTT CGAAGAGCTG CTGACCCATC AGCTGTCGCA ACAACGCCTG CGCGAAAGCC TGCGCAGCCT GCGTGCACCG GTATTGCCCA AGGCCACGCG CCTGCAGGCG CAATACCTGG CCAACCTAGG CTTCCAGCCG ACCGGCGCGC AGCAGCGGGT AGCCAACGAA ATTGCCTACG ACCTCAGCCA GCACGCGCCA ATGATGCGCC TGGTACAAGG CGATGTGGGG GCGGGCAAGA CCGTGGTTGC CGCCCTGGCT GCGTTGCAGG GCCTGGAAGC GGGCTACCAG GTGGCGCTGA TGGCACCCAC CGAGATTCTC GCCGAACAGC ACTACATCAC CTTCAAACGC TGGCTCGAAC CGCTTGGCAT CGAAGTGGCG TGGCTGGCTG GCAAGCTCAA GGGCAAGGCC CGGGCAGCCT CGTTGGAGCA GATCGCCAAC GGTGCCCCCA TGGTGGTCGG CACCCACGCG CTGTTCCAGG AAGAGGTCAA GTTCAAGCAC CTGGCCCTGG CGATCATCGA CGAACAGCAC CGGTTCGGCG TACAGCAACG CCTGGCCCTG CGCAAAAAAG GCGTGGCCGG CGAGCTGTGC CCACACCAGT TGATCATGAC TGCCACGCCT ATTCCGCGCA CCCTAGCCAT GAGCGCCTAT GCCGACCTGG ACACCTCGGT GCTCGACGAA CTGCCGCCTG GGCGTACCCC GGTGAACACG GTGCTGGTGG CCGACAGCCG CCGCTTCGAG GTGGTGGAGC GGGTTCGCGC CGCTTGCGCC GAGGGGCGCC AGGCCTATTG GGTGTGCACC CTGATCGAAG AGTCTGAAGA GCTGACCTGT CAGGCAGCCG AAAGCACTTA TGAAGAACTC GGCAGCGCCT TGGGCGAACT GCGTGTGGGC CTGATTCACG GCCGCATGAA ACCTGCCGAA AAAGCCGAGA TCATGGCGCA GTTCAAGGCC GGTGAGTTGC AGTTGCTGGT CGCGACCACT GTCATCGAAG TCGGCGTGGA CGTACCCAAC GCCAGCCTGA TGATCATCGA AAACCCCGAA CGCCTGGGCC TTGCCCAACT GCATCAGCTG CGCGGCCGGG TTGGCCGGGG CAGCGCCGTC AGCCATTGCG TGCTGCTGTA CCACCCACCG CTGTCGCAGA TCGGTCGCGA GCGCTTGGGG ATCATGCGCG AAACCAACGA TGGCTTCATC ATCGCCGAAA AGGACCTTGA GCTGCGTGGT CCGGGCGAGA TGCTGGGCAC CCGCCAAACC GGCCTGCTGC AGTTCAAGGT CGCCGACCTG ATGCGCGACG CCGACCTGCT GCCGGCTGTG CGAGACGCCG CTCAAGCCCT GGTCGCGCGC TGGCCGGATC ATGTCAGCCC GCTACTCGAC CGCTGGCTGC GCCATGGCCA GCAATATGGC CAAGTGTGA
|
Protein sequence | MSELSKVPVT VLKGVGEAMA EKLAKVGLEN LQDVLFHLPL RYQDRTRVVP IGQLRPGQDA VIEGVVSGSD VTMGKRRSLV VRLGDGSGVL TLRFYHFSNA QKEGLKRGTH LRCYGEARPG ASGLEIYHPE YRALNGDEPP PPVEQTLTPI YPSTEGLTQQ RLRLLCQQSL GLLGPRSLPD WLPDELARDY QLAPLDEAIR YLHNPPADAD LDELAEGQHW AQHRLAFEEL LTHQLSQQRL RESLRSLRAP VLPKATRLQA QYLANLGFQP TGAQQRVANE IAYDLSQHAP MMRLVQGDVG AGKTVVAALA ALQGLEAGYQ VALMAPTEIL AEQHYITFKR WLEPLGIEVA WLAGKLKGKA RAASLEQIAN GAPMVVGTHA LFQEEVKFKH LALAIIDEQH RFGVQQRLAL RKKGVAGELC PHQLIMTATP IPRTLAMSAY ADLDTSVLDE LPPGRTPVNT VLVADSRRFE VVERVRAACA EGRQAYWVCT LIEESEELTC QAAESTYEEL GSALGELRVG LIHGRMKPAE KAEIMAQFKA GELQLLVATT VIEVGVDVPN ASLMIIENPE RLGLAQLHQL RGRVGRGSAV SHCVLLYHPP LSQIGRERLG IMRETNDGFI IAEKDLELRG PGEMLGTRQT GLLQFKVADL MRDADLLPAV RDAAQALVAR WPDHVSPLLD RWLRHGQQYG QV
|
| |