Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5354 |
Symbol | |
ID | 5873169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5978457 |
End bp | 5979437 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550490 |
Product | tonB-system energizer ExbB |
Protein accession | YP_001671571 |
Protein GI | 167036340 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.325713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.587321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTA CTCAACCTTC CGCTTCGCCA ACCCCGTCGC GCGCCTGGCG CGCCATCGCC GCGCTGACGC TCAGCCTGGT GCTGGCCCCG GTGGCCATGG CCGATGAGCC AACTGCCAAT GCCGCCACGC CTGCCGCTGC TTCTGCTCCG GCCGCTCCGG CAGCACCTGC CGTGGAAGGC CAGGCACCTG CAGGCCAAGC GCAAGCTGCC GCCCCGGCAG ATTCGCAGGT ACTGGTCGAC CCCGCCACCG ATACACTGGT TGAAGACACC TCGCTGGGCA TGGCGCACGA CCTGTCCCCA TGGGGCATGT ACAAGAACGC CGACATCGTG GTGAAGATCG TCATGATCGG CCTGGCCATC GCCTCCATCA TCACCTGGAC CATCTGGATC GCCAAAGGCT TCGAGCTGAT GGGCGCCAAA CGTCGCCTGC GGGGTGAAAT TGCCCAGCTG AAGAAATCCA CCACCCTTAA AGAAGCCAGC GAAGTCTCCA ACAAGGAAGG CACCCTGGCC CACACGCTGG TCCACGATGC CCTCGAAGAA ATGCGTCTGT CGGCCAACGC CCGTGAAAAA GAGGGTATCA AGGAACGCGT CAGCTTCCGC CTGGAGCGCC TGGTGCATGC CAGCGGCCGC ACCATGAGCA GCGGCACCGG CGTCCTGGCC ACCATCGGCT CCACCGCGCC GTTCGTCGGT CTGTTCGGTA CCGTATGGGG CATCATGAAC AGCTTCATCG GCATCGCCAA GACCCAGACC ACCAACCTGG CCGTGGTTGC CCCAGGTATC GCCGAAGCCC TGCTGGCCAC CGCCCTGGGT CTGGTCGCGG CAATCCCGGC TGTGGTCATC TACAACGTCT TCGCCCGCTC CATTGCCGGC TACAAGGCCC AGGTGTCCGA CGCCTCCGCA CAGGTACTGC TGCTGGTCAG CCGTGACCTG GACCACCAGG GCAGCGAGCG CGCTGCCCCG CACATGGTGA AAGTGGGGTA A
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Protein sequence | MTRTQPSASP TPSRAWRAIA ALTLSLVLAP VAMADEPTAN AATPAAASAP AAPAAPAVEG QAPAGQAQAA APADSQVLVD PATDTLVEDT SLGMAHDLSP WGMYKNADIV VKIVMIGLAI ASIITWTIWI AKGFELMGAK RRLRGEIAQL KKSTTLKEAS EVSNKEGTLA HTLVHDALEE MRLSANAREK EGIKERVSFR LERLVHASGR TMSSGTGVLA TIGSTAPFVG LFGTVWGIMN SFIGIAKTQT TNLAVVAPGI AEALLATALG LVAAIPAVVI YNVFARSIAG YKAQVSDASA QVLLLVSRDL DHQGSERAAP HMVKVG
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