Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5346 |
Symbol | |
ID | 5873161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5970156 |
End bp | 5970923 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550482 |
Product | peptidase C26 |
Protein accession | YP_001671563 |
Protein GI | 167036332 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.176756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA CTGCGGTCCC CTTGATCGGT GTCAGCGCCT GCCGTCAGCA GGTGGGGAAG AACTCGTCGC ACACGGTGGG CGACAAGTAT GTCGAGGCGG CCGGCTTTGC CGGCTTACCG CTGATCTTGC CGGCCCGTGA TGGCGGCAGC GACACGCATG CGCTGCTGGC TCGCCTGCAC GGCATTGTTT TTACCGGCTC GCCTTCAAAT ATCGAACCGC ATCATTACAA TGGCGCCCCC AGTGTGGCAG GTACCCGGCA TGACCTGGCG CGTGATCGCC TGACCCTGCC GCTGCTGCAG GCGGCCATTG CCGCCGGTGT GCCGGTGTTC TGCATTTGCC GTGGCTACCA GGAACTGAAC GTGGCCCTTG GCGGCAGCCT GCACCAGCGC GTGCAGGAAC TGCCTGGATA CCTGGATCAC CGCGAACCTG AGGATGCCCC CCTGGAGGTG CAGTACGGCC CTCGTCACCC GGTCGGCATC GAGCCTGGCG GGTTGTTCGA GCGCTTGGGC CTGGCGGCGC AGTTCGAGGT CAACTCGCTG CACAGTCAGG GCATCGACCG CCTGGCCCCA GGCCTGCGTG TCGAGGCACG GGCCCCGGAT GGCCTGATCG AAGCAGTGTC CATGCCCGAC GCGCCGGGCT TTGTGCTTGG CGTGCAGTGG CACCCGGAGT GGCGCTTCAA CGAAAACCCG GTCTCGCTGC GCCTGTTTCA GGCGTTTCGC GAGGCCTGCA TTGCCTATGC AGCACGGGAG GGTGCACGGC AGGAATGA
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Protein sequence | MSATAVPLIG VSACRQQVGK NSSHTVGDKY VEAAGFAGLP LILPARDGGS DTHALLARLH GIVFTGSPSN IEPHHYNGAP SVAGTRHDLA RDRLTLPLLQ AAIAAGVPVF CICRGYQELN VALGGSLHQR VQELPGYLDH REPEDAPLEV QYGPRHPVGI EPGGLFERLG LAAQFEVNSL HSQGIDRLAP GLRVEARAPD GLIEAVSMPD APGFVLGVQW HPEWRFNENP VSLRLFQAFR EACIAYAARE GARQE
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