| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5316 |
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| Symbol | |
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| ID | 5873131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5938938 |
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| End bp | 5940947 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550452 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001671533 |
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| Protein GI | 167036302 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.640166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0761543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAC TCAATCCCCG GCAGCAGGAA GCCCGTGACT ATGTCGGCGG CCCTCTTTTG
GTGCTCGCCG GTGCAGGCTC GGGCAAGACC AGCGTGATCA CGCGCAAGAT TGCCCACCTC
ATCCAGAACT GCGGCATCCG TGCCCAGTAC ATCGTGGCGA TGACCTTTAC CAACAAGGCC
GCGCGCGAGA TGAAGGAGCG TGTCGGCACC TTGCTGCGCC CGGGGGAAGG CCGAGGGCTT
ACGGTGTGCA CGTTCCACAA CCTGGGCCTG AACATCATCC GCAAGGAGCA CGAGCGCCTC
GGCTACAAGC CGGGCTTCTC GATCTTCGAC GAGTCCGACA TCAAGGCGTT GCTGTCGGAC
ATCATGCAGA AGGAATACTC CGGCGACGAC GGCATCGACG AGATCAAGAA CATGATCGGT
GCCTGGAAGA ACGACCTTAT CCTGCCGCCA GAGGCCCTGG AAAAAGCGCG CAACCCGCGC
GAGCAGACCG CCGCCATCGT CTACACCCAC TACCAGCGCA CGCTCAAGGC GTTCAACGCG
GTGGACTTCG ACGACCTGAT CCTGCAACCG GTCAAGTTGT TCCAGGAGCA CCCTGAAGTG
CTGGAGCGCT GGCAGAACCG CGTGCGCTAC CTGCTGGTGG ACGAATACCA GGACACCAAC
GCCAGCCAGT ACCTGCTGGT GAAGATGCTG ATCGGCATGC GCAACCAGTT CACCGTGGTG
GGCGACGACG ACCAGTCGAT CTACGCCTGG CGAGGTGCCC GCCCGGAAAA CCTGATGCTG
CTCAAGGAGG ACTACCCCTC CCTGAAGATC GTCATGCTCG AACAGAACTA CCGCTCCACC
AGCCGTATCC TGCGCTGCGC CAACGTGCTG ATTGCCAACA ACCCGCACGC GTTCGAAAAG
CAGCTGTGGA GCGAAATGGG CGTAGGCGAC GAGATCCGCG TGATCCGCTG CAAAAACGAG
GAAGCCGAGG CCGAACGCGT GGCCATGGAA ATCCTCACCT TGCACCTGCG CACCAACCGC
CCGTACAGCG ACTTCGCCAT CCTCTACCGG GGCAACTACC AGGCCAAGCT GATCGAACTG
AAGCTGCAGC ACCACCAGGT GCCGTATCGC CTGTCGGGCG GCAACAGCTT CTTCGGCCGC
CAGGAGGTCA AGGACCTGAT GGCCTACCTG CGCCTGCTGG TGAACCCGGA CGATGACAAC
GCCTACTTGC GGGTGATCAA CGTACCGCGC CGGGAAATCG GCTCCACCAC CCTGGAAAAG
CTCGGCAACT ACTCCACCGA ACGCGGCATT TCGATGTACG CCGCCAGCGA GGAGTTGGGC
TTGGGCGAGC ACCTGGACGC CCGCTACACC GAACGTTTGC AGCGCTTCAA GCACTGGCTG
GACGGGGTGC GTCACAAGGT CGCCCTGGAA GACCCGATTG CCGCACTGCA CGAGATGATC
CGCGACATCG ACTACGAGAA CTGGATCCGC CAGCAGACCG CCAGCGACAA GGCTGCGGAC
TTCCGTATCA GCAACGTCTG GTTCCTGGTC GAAGCGCTGA AAAACACCCT CGAGAAGGAT
GAAGAGGGTG ACATGACCAT CGAGGACGCC ATCGGCAAGC TGGTGCTGCG CGACATGCTC
GAGCGCCAGC AGGAAGAGGA AGAAAACGCC GAAGGTGTGC AGATGATGAC CCTGCACGCC
TCCAAGGGCC TGGAGTTCCC TTACGTATTC ATCATGGGCA TGGAAGAGGA AATCCTCCCG
CACCGCTCCA GCATCGAGGC CGACACCATC GAAGAGGAAC GCCGCCTGGC CTACGTGGGC
ATTACCCGCG CGCGCCAGAC TCTGGCCTTC ACCTTCGCTG CCAAGCGCAA GCAGTACGGT
GAAATCATCG ACTGCACGCC AAGCCGGTTC CTCGACGAAC TGCCTCCGGA CGACCTGGCC
TGGGAGGGCC TGGACGATGC ACCGGTCGAG GTGAAGGCCG CACGCGGCAA CAACGCCCTG
GCCGATATCC GGGCAATGCT CAAACGCTGA
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| Protein sequence | MSRLNPRQQE ARDYVGGPLL VLAGAGSGKT SVITRKIAHL IQNCGIRAQY IVAMTFTNKA
AREMKERVGT LLRPGEGRGL TVCTFHNLGL NIIRKEHERL GYKPGFSIFD ESDIKALLSD
IMQKEYSGDD GIDEIKNMIG AWKNDLILPP EALEKARNPR EQTAAIVYTH YQRTLKAFNA
VDFDDLILQP VKLFQEHPEV LERWQNRVRY LLVDEYQDTN ASQYLLVKML IGMRNQFTVV
GDDDQSIYAW RGARPENLML LKEDYPSLKI VMLEQNYRST SRILRCANVL IANNPHAFEK
QLWSEMGVGD EIRVIRCKNE EAEAERVAME ILTLHLRTNR PYSDFAILYR GNYQAKLIEL
KLQHHQVPYR LSGGNSFFGR QEVKDLMAYL RLLVNPDDDN AYLRVINVPR REIGSTTLEK
LGNYSTERGI SMYAASEELG LGEHLDARYT ERLQRFKHWL DGVRHKVALE DPIAALHEMI
RDIDYENWIR QQTASDKAAD FRISNVWFLV EALKNTLEKD EEGDMTIEDA IGKLVLRDML
ERQQEEEENA EGVQMMTLHA SKGLEFPYVF IMGMEEEILP HRSSIEADTI EEERRLAYVG
ITRARQTLAF TFAAKRKQYG EIIDCTPSRF LDELPPDDLA WEGLDDAPVE VKAARGNNAL
ADIRAMLKR
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