| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5308 |
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| Symbol | |
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| ID | 5873123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5927285 |
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| End bp | 5928811 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550444 |
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| Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
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| Protein accession | YP_001671525 |
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| Protein GI | 167036294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.119708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTTGG TTTTGCTGGC CTCTTCGCGG GCTGCCATTG CCTGCCCTGC AAACCTGCTC
TATTACTACC CACAGCCCTC CCCTCACCCC GAGACCACCA TGCTGGCGTT CATCCAGTCA
TCCCCGTTGT TGCTCGGTAC CGCCCTGATC CTGCTCGACC TCGTGCTCTG GCAAGCCATC
CCCATGCAAC GCCGAGCCTG GCGCATCGGT ACGCGGCTGG TGATATTCCT GCTGTTCAGT
TCGGTACTGG TGGCCGCCGG CATGAGCCCG CTGCAGCCGC CACCCTGGCC CGACGATGTC
TCGCGCAACC TGATGGCCAC GGTACTGGCG ATCGGCTGGT GGCTGTTTGG CGCACGCACG
GTGACCGTGG TGTTCGGCCT GTTGCTGGTA GCCCGTGGCA GCCATGGCGG GCGGTTGCTG
CAGGATGTGC TGGGGGCGTT GATCTTCCTG GCCGCCGTGG TGGCTGCCGC AGGCTATGTG
ATGCAGCTGC CGGTGAAGGG CCTGCTGGCC ACCTCCGGGG TGATGGCCAT CGTCATTGGC
CTGGCGTTGC AGAGCACCCT GGCCGACGTG TTCAGCGGCA TCGTGCTGAA CACCACGCGG
CCCTACCAGA TCGGCGATTC CATCTCTATC GACGGCACCG AAGGCAAGGT GCTGGACATC
GACTGGCGCG CCACCCGCTT GCTCACCGGC AGCGGCAGTT TGGCGGTGAT CCCCAACTCG
GTGGCGGCCA AGGCACGGCT GCTCAACCAC AGCCGCCCGG CCGATGTGCA TGGGGTCACG
ATCAGCGTGG TGGTGCCGGC CAAGGTGCGC CCCAAGCGGG TGTTCGACGC GCTGGAAAAG
GCCTTGCAAG GCGTCAGTGC CATTCTTGCC ACCCCAAAAC CGAAAGTAAC GGTGAAGGCC
TCGACGCTGG AGTCAGTGGA GTACGAGGCC AGTGGCTTCG TGGCCGATAT GGGCGCCAAG
GGTGACGCGC GCAACCAGCT GTTCGACCTG GCGCACCGGC ATCTGGAAGC CAGCGGAGTG
ATGTGGAACG TCGACCTGGC CGTGCCGCCG CGCAGCCGCC AGCGCGAAGT GCTGGACGAG
GTCCGCGTGT TCCGCTCGCT GAGCGATGAA GAGCGAGACG CCTTGAGCCA GCGCATGACC
GCAGTGGAGT ACCTGCCGGA CCAGGTGATC CTGGGGGTTG GCGAGCATTC AGATCATTTG
CTGGTGATTG GCAGCGGGGT GGTATCGGCG TCGGTGCGCG ATGGCGACAA ACTGCTGGAA
GCCGGGCGCA TGGGGCCGGG TGAAGTGCTG GGGATCGAGG GCATCATCGA CGAAGACGAT
TCGCTGGCCG AGTTCCGCAC GCTGACCAGC TGCGTGCTGT ACCGCATCGA CAAGGAACAG
GTGAAGAGCT GCCTGCAGCA GCGTGGCGAA GTGCAGACGG CGTTGAGCAA GTTGCAGCGG
TTTCGGCGGC AGAACCGCGA GTCGTTGTTG CTGCAGAAGC CGGCCCTGAT CAAGAAAGGC
GGCTTCCTCA GCTGGTTACA CAAGTAA
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| Protein sequence | MALVLLASSR AAIACPANLL YYYPQPSPHP ETTMLAFIQS SPLLLGTALI LLDLVLWQAI
PMQRRAWRIG TRLVIFLLFS SVLVAAGMSP LQPPPWPDDV SRNLMATVLA IGWWLFGART
VTVVFGLLLV ARGSHGGRLL QDVLGALIFL AAVVAAAGYV MQLPVKGLLA TSGVMAIVIG
LALQSTLADV FSGIVLNTTR PYQIGDSISI DGTEGKVLDI DWRATRLLTG SGSLAVIPNS
VAAKARLLNH SRPADVHGVT ISVVVPAKVR PKRVFDALEK ALQGVSAILA TPKPKVTVKA
STLESVEYEA SGFVADMGAK GDARNQLFDL AHRHLEASGV MWNVDLAVPP RSRQREVLDE
VRVFRSLSDE ERDALSQRMT AVEYLPDQVI LGVGEHSDHL LVIGSGVVSA SVRDGDKLLE
AGRMGPGEVL GIEGIIDEDD SLAEFRTLTS CVLYRIDKEQ VKSCLQQRGE VQTALSKLQR
FRRQNRESLL LQKPALIKKG GFLSWLHK
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