Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5269 |
Symbol | |
ID | 5873084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5887221 |
End bp | 5888333 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550406 |
Product | ABC-2 type transporter |
Protein accession | YP_001671487 |
Protein GI | 167036256 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.139137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCC TGAACCACAC CCTGCGCCTA GGCCTGAAAG AACTGACCAG CCTGCGTCAT GACAGCGTAC TGCTGCTGTT CCTGCTGTAT GCCTTCAGCG TGGCGATCTA CATGCCGGCC GCCGGCTCGG TGATCGGTGT GCACAACGCC AGCGTCGCGG TGGTGGACGA AGACCACAGC CTGCTCTCGC GCAAGCTCAG TGAAGCCCTG CAACCACCGG AGTTTCAACC TGCCGTTCCG CTGACCGCGC AACACCTGGA CCAGGCCATG GACAGCGGCC AGTACACCTT CGTGATCAAC GTACCGGTGA ATTTCCAGAG TGACCTGCTG GCCGGGCGCT CGCCGGAGCT GCAGATAAAC GTCGATGCCA CGGCCATGAG CCAGGCGTTC ATGGGCGCCG GCTACATCGG CCGCATCTTC GAGCGCGAGC TGCTCGACTA CAGCCAGCGG GGCAACGTGC AAAGCCCGGT GCTGATCAAC CCCAAGGCGC TGTTCAACCC CAACCTGGAG GGCGGTTGGT TCCTGGCGGT GATCCAGATC GTCAACAACA TCACCATCCT GGCAATCATC CTCACCGGCA CCGCGCTGCT GCGCGAGCGT GAGCACGGCA CCCTCGACCA CCTGCTGGTG CTGCCACTGA CCGCGCTGGA GATCATGCTG GCCAAGATCG GCAGCAACGC CCTGGTGGTG GTGATATGCA CCTGGATTTC GTTGGTGGTG GTAGTGAAAG GCGCGCTGGG CGTGCCGTTG TCCGGCTCGA TGGGGTTGTT CCTGGCCGTG ACCGCGCTGT ACCTGTTCGC CAGTACGGCG CTGGGTATCT TCCTCGCCAC CCTGGCACGC TCGACGCCGC AGTTCGGCCT GCTGGCGATC CCGGTGATCA TCCCGATGCT GTTGCTGTCC GGCGGCAGCA CACCGCTGGA CAGCATGCCG CAGTGGCTGC AGTGGGTGAT GCAGGGGTCG CCGTCGACGC ATTTCGTCAG CCTGGGGGCC GCGATCCTGT TCCGCGATGC CGGGTGGGCG GTGGTGTGGC CGGATATCCT GGCACTGGCG CTGATCGGCC TGGTATTTTT CAGCGTGGCG CTTTCGCGGT TCCGTCGCAG CCTGGCGTCC TGA
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Protein sequence | MSRLNHTLRL GLKELTSLRH DSVLLLFLLY AFSVAIYMPA AGSVIGVHNA SVAVVDEDHS LLSRKLSEAL QPPEFQPAVP LTAQHLDQAM DSGQYTFVIN VPVNFQSDLL AGRSPELQIN VDATAMSQAF MGAGYIGRIF ERELLDYSQR GNVQSPVLIN PKALFNPNLE GGWFLAVIQI VNNITILAII LTGTALLRER EHGTLDHLLV LPLTALEIML AKIGSNALVV VICTWISLVV VVKGALGVPL SGSMGLFLAV TALYLFASTA LGIFLATLAR STPQFGLLAI PVIIPMLLLS GGSTPLDSMP QWLQWVMQGS PSTHFVSLGA AILFRDAGWA VVWPDILALA LIGLVFFSVA LSRFRRSLAS
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