| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5256 |
|---|
| Symbol | |
|---|
| ID | 5873070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5875043 |
|---|
| End bp | 5876044 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641550392 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001671474 |
|---|
| Protein GI | 167036243 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCAC GCAAGCCCCT ACTGGCCGCT CTGGCCCTGA CCCTGTTCGG CGGCACCGCC
CAAGCAGCGG ACGAAGTGGT GGTGTACTCC TCGCGCATCG ACGAGCTGAT CAAGCCGGTG
TTCGATGCGT ATACCGCCAA GACCGGGGTC AAGATCAAGT TCATCACCGA CAAGGAAGCC
CCGCTGATGC AGCGCATCAA GGCCGAGGGC GACAACGGCG TGGCCGACCT GCTGCTGACC
GTCGATGCCG GCAACCTGTG GCAGGCCGAG CAGATGGGCA TTCTGCAGCC AATCAAGTCC
GACATCATCG ACCAGAACAT TCCGCCGCAG TACCGCGCCT CGTCCCATGA CTGGACCGGC
CTGAGCCTGC GCGCTCGCAC CATCATCTAC TCCACCGAGC GGGTCAAACC CGAGGAGTTG
AGCACCTACG AAGCCCTGGC TGACAAGCAG TGGGAAGGCC GCCTGTGCCT GCGCACCGCG
AAGAAAGTGT ACAACCAGTC GCTGACCGCC ACCCTGATCG AAACCCACGG TGAGGCGAAG
ACCGAGCAAG TCGTCAAAGG CTGGGTCAAC AACCTGTCCA CCGATGTGTT CTCCGACGAC
AACGCGGTGA TCCAGGCCAT CGAGGCCGGC CAGTGTGACG TGGGTGTGGT CAACACCTAC
TACTACGGCC GCCTGCACAA GCAGAACCCG AACCTGCCGG TGAAGATCTT CTGGCCCAAC
CAGGGTGATC GTGGGGTGCA CGTGAACCTG TCGGGTATTG GCCTGACCAA GCATGCACCG
CACCCGGAAG CCGCGAAAAA GCTGGTGGAA TGGATGACGG GTGAAGAAGC GCAGAAGCTG
TTCGCCGACA TCAACCAGGA GTTCCCGGCC AACCCGAAGG TCAAGCCTTC GGATGAAGTG
GCGGCATGGG GCAGCTTCAA GGCTGACAGC ATTCCGGTGG AAATTGCCGG CAAGCGCCAG
GCTGAAGCCA TTCGCTTGAT GGATCGCGCT GGCTACAACT AA
|
|---|
| Protein sequence | MLPRKPLLAA LALTLFGGTA QAADEVVVYS SRIDELIKPV FDAYTAKTGV KIKFITDKEA
PLMQRIKAEG DNGVADLLLT VDAGNLWQAE QMGILQPIKS DIIDQNIPPQ YRASSHDWTG
LSLRARTIIY STERVKPEEL STYEALADKQ WEGRLCLRTA KKVYNQSLTA TLIETHGEAK
TEQVVKGWVN NLSTDVFSDD NAVIQAIEAG QCDVGVVNTY YYGRLHKQNP NLPVKIFWPN
QGDRGVHVNL SGIGLTKHAP HPEAAKKLVE WMTGEEAQKL FADINQEFPA NPKVKPSDEV
AAWGSFKADS IPVEIAGKRQ AEAIRLMDRA GYN
|
|---|
| |