Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5241 |
Symbol | |
ID | 5873055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5855109 |
End bp | 5856206 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641550377 |
Product | extracellular solute-binding protein |
Protein accession | YP_001671459 |
Protein GI | 167036228 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TGGGCAAGAC GTTGCTGGCC GCAGCCCTGA TGGGTGCCAT GGCTACTGCT GCACAGGCTG ACGACAAGGT GTTGAACGTC TACAACTGGT CGGACTACAT CGCGCCGGAC ACCATCGCCA AGTTCGAAAA GCAGACCGGT ATCAAGGTCA AGTACGACGT CTTCGACAGC AACGAAACCC TGGAAGCCAA GCTGCTGGCA GGTAAGTCGG GCTATGACAT CGTCGTGCCC TCGAACAACT TCCTGGCCAA GCAGATCAAG GCGGGTGTGT ACGAGGAACT GGACCGTTCG AAACTGCCGA ACTGGAAAAA CCTCGACCCC GACCTGCTCA AGGCCGTTGG CGATGCCAGC GACAAGGACA ACAAGCACGC CTTCCCGTAC ATGTGGGGTT CCATCGGCAT CGGCTACAAC CCGGAGAAGG TCAAGGCCGC GCTGGGTGTC GACCACATCG ACTCGTGGGA CGCCGTGTTC AAGCCTGAGA ACATCGCCAA GCTCAAGAGC TGCGGCGTAA GCTTCCTGGA TGCCCCGACC GAAATGCTGC CGGCCGCACT GCACTACCTG GGCCTGCCGA GCAACAGCAC CAAGAAAGAA GACCTGAAGG CCGCCGAGGA CCTGTTCCTC AAGGTCCGTC CTTCGATCAC CTACTTCCAC TCGTCCAAGT ACATTGGCGA CCTGGCCAAC GGCAACATCT GCGTGGCCGT CGGTTATTCG GGTGACGTCG AGCAGGCCAA GGCCCGTGCC CACGAAGCCG GCGACAAGAT CAAAGTGGAC TACATCATTC CGAAAGAAGG TGCCGGTACT TTCTACGACA TGGTCGCCAT CCCGAAAGAT GCCGAGCATA AAGACGCTGC CTACCAGTTC ATGGACTTCC TGATGCAGCC AGAAGTCATG GCTGAAATCA CCAACGCCGT GCGCTTCCCG AACGGCAATG CTGCGGCTAC CCAGTTCGTG GACAAGGACA TTACCAGCGA CCCGAGCATC TACCCGCCTG CCGAAGTGAA GAAGCAGCTG TACGCAATCG CTGCGCCTGA AGCTTCTGCC CAGCGTGTGA TCACCCGCAG CTGGACCAAG ATCAAGTCGG GCAAGTAA
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Protein sequence | MNKMGKTLLA AALMGAMATA AQADDKVLNV YNWSDYIAPD TIAKFEKQTG IKVKYDVFDS NETLEAKLLA GKSGYDIVVP SNNFLAKQIK AGVYEELDRS KLPNWKNLDP DLLKAVGDAS DKDNKHAFPY MWGSIGIGYN PEKVKAALGV DHIDSWDAVF KPENIAKLKS CGVSFLDAPT EMLPAALHYL GLPSNSTKKE DLKAAEDLFL KVRPSITYFH SSKYIGDLAN GNICVAVGYS GDVEQAKARA HEAGDKIKVD YIIPKEGAGT FYDMVAIPKD AEHKDAAYQF MDFLMQPEVM AEITNAVRFP NGNAAATQFV DKDITSDPSI YPPAEVKKQL YAIAAPEASA QRVITRSWTK IKSGK
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