Gene PputGB1_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5203 
Symbol 
ID5873017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand+ 
Start bp5817764 
End bp5818438 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID641550339 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001671421 
Protein GI167036190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGG ACCAACTCAA ACAGGCCGTC GCCCAGGCCG CTGTCGACTT CATTCTGCCC 
AAGCTGGATG AAAAGAGCGT TGTCGGCGTC GGTACCGGTT CGACCGCCAA CTTCTTCATC 
GACGCCCTGG CTCAGCACAA GACCGCCTTC GACGGCGCAG TCGCCAGCTC CGAAGCCACT 
GCCCAGCGCC TGAAGGGCCA TGGCATCCCG GTGTACGAGC TGAACAGCGT CAGCGAGCTT 
GAGTTCTACG TGGACGGCGC CGACGAAAGC GACGCGCACC TGAACCTGAT CAAGGGCGGC 
GGCGCAGCCC TGACCCGCGA GAAGATCGTC GCGGCCGTGG CCAAGACCTT CATCTGCATC 
GCCGACGGTA GCAAGCTGGT GCCCGTGCTG GGCGCCTTCC CGCTGCCGGT TGAAGTGATC 
CCGATGGCCC GCAGCCACGT GGCGCGCCAG CTGGTCAAGC TGGGCGGCGA CCCGGTGTAC 
CGCGAAGGCG TGGTCACCGA CAACGGCAAC GTGATCCTCG ACGTGCACAA CCTGCAGATC 
ACCAACCCGG TGGAGCTGGA AGCGCAGATC AACGCCATCG TTGGCGTGGT CACCAACGGC 
CTGTTCGCGG CGCGACCGGC GGACCTGCTG CTGCTGGGCA CCTCTGAAGG TGTGAAGAGC 
CTGAAGGCCG AGTAA
 
Protein sequence
MTQDQLKQAV AQAAVDFILP KLDEKSVVGV GTGSTANFFI DALAQHKTAF DGAVASSEAT 
AQRLKGHGIP VYELNSVSEL EFYVDGADES DAHLNLIKGG GAALTREKIV AAVAKTFICI 
ADGSKLVPVL GAFPLPVEVI PMARSHVARQ LVKLGGDPVY REGVVTDNGN VILDVHNLQI 
TNPVELEAQI NAIVGVVTNG LFAARPADLL LLGTSEGVKS LKAE