Gene PputGB1_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5188 
Symbol 
ID5873002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5800656 
End bp5801681 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content61% 
IMG OID641550324 
Product2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component 
Protein accessionYP_001671406 
Protein GI167036175 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.491174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC ACCTTGCACT TGCCGCTGCT GTTTGCGCCG TGTTCAGCCT GCAGGCTTCG 
GCCGCCAATA CCCAGCTGAC GGTCTACACC GCGCTGGAAG CCGAGCAATT GAAGAGCTAC
AAACAAGCCT TCGAAAAAGC CAACCCGGAT ATCGAGATAA AGTGGGTGCG TGATTCCACC
GGCATCATCA CCGCCAAGCT GCTGGCCGAG AAAGACCGCC CGCAAGCCGA CGCGGTTTGG
GGCCTGGCGG CGTCCAGCCT GGCGATTCTC GACCAGAACG GCATGCTTGA AGCCTATGCA
CCGAAAGACC TGGGCAAGAT CTCCGGCAAC TACCGGGACG CTGCCAACCC TCCGGCTTGG
GTGGGTATGG ATGTGTGGGC CGCGACCATC TGCTTCAATA CCATCGAGGC CGAGAAGCAG
GGCCTGAGCA AACCGGTGAG CTGGCAGGAC CTGACCAAGC CCGAGTACAA GGGCAAGATC
GTCATGCCCA ACCCGGCCTC GTCCGGCACC GGTTTCCTTG ACGTGAGTGC CTGGTTGCAG
ACCTTCGGTG AACCGCAAGG CTGGGCCTAC ATGGACGCGC TGCACCAGAA CATCGGCCAG
TACGTTCATT CCGGCTCCAA ACCGTGCAAG CTGGCAGCGG CAGGCGAGTT CCCGATCGGT
ATTTCGTTCG AATACCCGGC CGTGCAGCTC AAGCGCCAGG GCGCCCCCCT GGACATCGTG
CTGCCGAAGG AAGGCCTGGG TTGGGAGATC GAGGCGACTG CAGTGATCAA GGGCTCGCCC
AAGGCGAATG CGGCCAAGCG CCTGGCTGAT TTCTCGGCAA GCCCGGCGGC CATGGAGCTG
TACAAGGAAA ACTTCGCCGT GCTGGCCGCG CCAGGCATTG CCAAGCCGCA GACCGAGTTG
CCGGCAGACT ATGAGCAGCG CCTGATCAAG AACGACTTTG CCTGGGCTTC GAAAAACCGG
GATGAAATCC TGACCGAATG GCGCAAGCGC TATGACGGCA AGTCGGAGAA GGTGGCCCAG
CAGTAA
 
Protein sequence
MYKHLALAAA VCAVFSLQAS AANTQLTVYT ALEAEQLKSY KQAFEKANPD IEIKWVRDST 
GIITAKLLAE KDRPQADAVW GLAASSLAIL DQNGMLEAYA PKDLGKISGN YRDAANPPAW
VGMDVWAATI CFNTIEAEKQ GLSKPVSWQD LTKPEYKGKI VMPNPASSGT GFLDVSAWLQ
TFGEPQGWAY MDALHQNIGQ YVHSGSKPCK LAAAGEFPIG ISFEYPAVQL KRQGAPLDIV
LPKEGLGWEI EATAVIKGSP KANAAKRLAD FSASPAAMEL YKENFAVLAA PGIAKPQTEL
PADYEQRLIK NDFAWASKNR DEILTEWRKR YDGKSEKVAQ Q