Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5176 |
Symbol | |
ID | 5872991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5787825 |
End bp | 5788697 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641550314 |
Product | putative signal transduction protein |
Protein accession | YP_001671396 |
Protein GI | 167036165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAAG AACTCAGCGC CGAACAGATC CAGCAAGCCT TGCAAGGCAT CACCATCCCG CCGCAACCGC AGATCATGGT CGACCTGCAG TTCGAGCAGT ACATGCCTGA CCCGGACCTG GAAACCATCG CCAAGCTGAT TTCCCAGGAC CCGGGCCTCT CTGGCGCCTT GCTCAAACTG GTCAATTCCC CGCATTTCGG CCTGTCCAAC AAGATCGGCT CGATCCAGCG CGCGGTGAAC CTGCTGGGTA GCCGTTCGAT CATCAACCTG ATCAACGCCC AGTCGATCAA GGGCGAGATG TGCGACGAAA CCATCGTTAC CCTCAACCGC TTCTGGGACA CCGCCCAGGA TGTGGCGATG ACCTGCCTGA CGCTGGCCAA GCGAACCGGT ATCCAGGCAG CGGACGAGGC CTACACCCTT GGTTTGTTCC ATGATTGTGG CGTGCCGCTG ATGCTCAAGC GCTTTCCCAA TTACATGGAT GTGCTGGAAG AGGCATACGC CAAGGCCGAC GAAGCAACGC GCGTGGTCGA CACCGAAAAC CGCACGTTCA ACACCAACCA TTCGGTGGTT GGCTATTTCA CCGCCAAGTC CTGGCGTTTG CCCGAGCACC TCAGCGGGGC CATCGCCAAC CACCACAACG CCCTGGCTGT GTTCCGCGAC GACACCTCGC GCAATACCCA GAGCCAGCTG AAGAACCTGC TGGCGGTACT GAAGATGGCC GAGCACATTT GCGCGTCCTA CCGGGTACTG GGCAACCAGG CGGTGGACCA CGAATGGAAT GTAGTCGGCC CACTGGTGCT CGATTACATT GGCTTGTCGG AATACGATTT CGAAAACCTC AAGCAGAACA TTCGCGAGCT GGGCGGGCAC TGA
|
Protein sequence | MSQELSAEQI QQALQGITIP PQPQIMVDLQ FEQYMPDPDL ETIAKLISQD PGLSGALLKL VNSPHFGLSN KIGSIQRAVN LLGSRSIINL INAQSIKGEM CDETIVTLNR FWDTAQDVAM TCLTLAKRTG IQAADEAYTL GLFHDCGVPL MLKRFPNYMD VLEEAYAKAD EATRVVDTEN RTFNTNHSVV GYFTAKSWRL PEHLSGAIAN HHNALAVFRD DTSRNTQSQL KNLLAVLKMA EHICASYRVL GNQAVDHEWN VVGPLVLDYI GLSEYDFENL KQNIRELGGH
|
| |