Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5148 |
Symbol | |
ID | 5872963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5761907 |
End bp | 5762527 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550286 |
Product | methionine biosynthesis protein MetW |
Protein accession | YP_001671368 |
Protein GI | 167036137 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR02081] methionine biosynthesis protein MetW |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.740945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.654734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCG ATCTGGAAAT CATCCACGAC TGGATCCCCG CCGGCAGCCG GGTACTCGAC CTGGGCTGCG GCAGTGGCGA ACTGCTGGCC TCGCTGCGTG ACCGCAAGCA GGTCACCGGC TATGGCCTGG AGATCGACGC CGACAACATC GCCGCCTGCG TGGCCAAGGG CGTCAACGTC ATCGAGCAGG ACCTGGACAA AGGCCTGGGC AACTTCGCCA GCAACAGCTT CGACGTGGTG ATCATGACCC AGGCCCTGCA GGCCGTGGAG TACCCTGACC GCATCCTCGA CGAGATGCTG CGCGTGGGCC GCCAGTGCAT CATCACCTTC CCCAACTTCG GCCACTGGCG CTGCCGCTGG TACCTGGCGA CCAAAGGCCG CATGCCGGTC TCGGACTTCA TGCCGTACAC CTGGTACAAC ACACCGAACA TCCACTTCTG CACCTTCGCC GACTTCGAAG AACTGGTGCA CGAACGACGG GCCAAGGTGC TCGACCGCCT GGCGGTCGAC CACCTGCACC GCAACGGGTG GGGTGGCCGG CTATGGCCTA ATCTACTAGG TGAGATCGGC ATCTACCGCG TCAGCAGCCC GAGCCTGCAA GAGCACCAGC TCGCGGTCTG A
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Protein sequence | MRADLEIIHD WIPAGSRVLD LGCGSGELLA SLRDRKQVTG YGLEIDADNI AACVAKGVNV IEQDLDKGLG NFASNSFDVV IMTQALQAVE YPDRILDEML RVGRQCIITF PNFGHWRCRW YLATKGRMPV SDFMPYTWYN TPNIHFCTFA DFEELVHERR AKVLDRLAVD HLHRNGWGGR LWPNLLGEIG IYRVSSPSLQ EHQLAV
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