Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5137 |
Symbol | rpmE |
ID | 5872952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5750942 |
End bp | 5751157 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641550275 |
Product | 50S ribosomal protein L31 |
Protein accession | YP_001671357 |
Protein GI | 167036126 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAAG GTATCCACCC GAACTACGAA GTAGTTGCAG TCACCTGCAG CTGCGGCAAC AAGTTCGAAA CCCGTTCGAC CCTGGGCAAT GTCCTGTCGA TCGACGTTTG CAACCTGTGC CACCCGTTCT ACACCGGTAA GCAGAAAGTC CTGGACACCG GTGGTCGCGT ACAGAAGTTC GCCGACCGCT TCGGTATGTT CGGTACCAAG AAGTAA
|
Protein sequence | MKEGIHPNYE VVAVTCSCGN KFETRSTLGN VLSIDVCNLC HPFYTGKQKV LDTGGRVQKF ADRFGMFGTK K
|
| |