Gene PputGB1_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5100 
Symbol 
ID5872915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5698582 
End bp5699667 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID641550238 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001671320 
Protein GI167036089 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA GCGATGCACA GCACCGTCTG CTTCTGGACA ACCTGACTAC CGCCACGTTG 
CTGCTCAACG CCGAGCTGCG CCTGGAGTAC ATGAACCCGG CAGCGGAAAT GCTGCTGGCC
GTCAGTGGCC AGCGTAGCCA TGGGCAGTTC ATCAGCGAGC TGTTCACCGA ATCGACCGAG
GCACTCAGCT CGCTGCGCCA GGCGGTCGAG CAGGCGCATC CATTCACCAA GCGTGAAGCG
CAGCTCACTT CGCTGACCGG GCAGACCATC ACCGTCGACT ACGCGGTAAC GCCAATCCTG
CATCAGGGCC AGACCCTGCT GTTGCTCGAG GTGCACCCAC GCGACCGGCT GCTGCGCATC
ACCAAGGAAG AGGCTCAGCT GAGCAAGCAG GAAACCACCA AGATGCTGGT GCGCGGCCTG
GCCCATGAAA TCAAGAACCC CCTTGGTGGC ATCCGTGGCG CGGCCCAGTT GCTGGCCCGC
GAACTGCCCG AGGAAGGCCT GCGCGACTAC ACCAACGTGA TCATCGAAGA GGCCGACCGC
CTGCGTAACC TGGTCGACCG CATGCTCGGC TCTAACAAGC TGCCGTCGCT TGCCATGACC
AACATTCACG AAGTGCTGGA GCGAGTCTGT AGCCTGGTCG ACGCCGAAAG CCAGGGCTGC
ATCACTTTGG TGCGCGATTA CGACCCTAGC CTGCCGGACG TATTGATCGA CCGCGAGCAG
ATGATCCAGG CCGTACTCAA TATCGTGCGC AACGCCATGC AGGCGATCAG CTCGCAGAAT
GAACTGCGGC TGGGCCGCAT CACCTTGCGC AGCCGCGCCT TGCGCCAGTT CACCATCGGC
CACGTGCGCC ACCGCCTGGT GGCGCGGGTC GAGATCATCG ATAACGGCCC GGGCATCCCG
CCGGAACTGC AGGACACTCT CTTCTATCCC ATGGTCAGTG GCCGCCCGGA CGGCACCGGG
CTGGGCCTGG CCATTACCCA GAACATCATC AGCCAGCACC AGGGCCTGAT CGAGTGTGAA
AGCCACGCAG GCCACACCGC CTTCTCGATC TACCTGCCCC TGGAACAAGG AGCCACCGCC
TCATGA
 
Protein sequence
MTISDAQHRL LLDNLTTATL LLNAELRLEY MNPAAEMLLA VSGQRSHGQF ISELFTESTE 
ALSSLRQAVE QAHPFTKREA QLTSLTGQTI TVDYAVTPIL HQGQTLLLLE VHPRDRLLRI
TKEEAQLSKQ ETTKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEEGLRDY TNVIIEEADR
LRNLVDRMLG SNKLPSLAMT NIHEVLERVC SLVDAESQGC ITLVRDYDPS LPDVLIDREQ
MIQAVLNIVR NAMQAISSQN ELRLGRITLR SRALRQFTIG HVRHRLVARV EIIDNGPGIP
PELQDTLFYP MVSGRPDGTG LGLAITQNII SQHQGLIECE SHAGHTAFSI YLPLEQGATA
S