Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5100 |
Symbol | |
ID | 5872915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5698582 |
End bp | 5699667 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550238 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_001671320 |
Protein GI | 167036089 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA GCGATGCACA GCACCGTCTG CTTCTGGACA ACCTGACTAC CGCCACGTTG CTGCTCAACG CCGAGCTGCG CCTGGAGTAC ATGAACCCGG CAGCGGAAAT GCTGCTGGCC GTCAGTGGCC AGCGTAGCCA TGGGCAGTTC ATCAGCGAGC TGTTCACCGA ATCGACCGAG GCACTCAGCT CGCTGCGCCA GGCGGTCGAG CAGGCGCATC CATTCACCAA GCGTGAAGCG CAGCTCACTT CGCTGACCGG GCAGACCATC ACCGTCGACT ACGCGGTAAC GCCAATCCTG CATCAGGGCC AGACCCTGCT GTTGCTCGAG GTGCACCCAC GCGACCGGCT GCTGCGCATC ACCAAGGAAG AGGCTCAGCT GAGCAAGCAG GAAACCACCA AGATGCTGGT GCGCGGCCTG GCCCATGAAA TCAAGAACCC CCTTGGTGGC ATCCGTGGCG CGGCCCAGTT GCTGGCCCGC GAACTGCCCG AGGAAGGCCT GCGCGACTAC ACCAACGTGA TCATCGAAGA GGCCGACCGC CTGCGTAACC TGGTCGACCG CATGCTCGGC TCTAACAAGC TGCCGTCGCT TGCCATGACC AACATTCACG AAGTGCTGGA GCGAGTCTGT AGCCTGGTCG ACGCCGAAAG CCAGGGCTGC ATCACTTTGG TGCGCGATTA CGACCCTAGC CTGCCGGACG TATTGATCGA CCGCGAGCAG ATGATCCAGG CCGTACTCAA TATCGTGCGC AACGCCATGC AGGCGATCAG CTCGCAGAAT GAACTGCGGC TGGGCCGCAT CACCTTGCGC AGCCGCGCCT TGCGCCAGTT CACCATCGGC CACGTGCGCC ACCGCCTGGT GGCGCGGGTC GAGATCATCG ATAACGGCCC GGGCATCCCG CCGGAACTGC AGGACACTCT CTTCTATCCC ATGGTCAGTG GCCGCCCGGA CGGCACCGGG CTGGGCCTGG CCATTACCCA GAACATCATC AGCCAGCACC AGGGCCTGAT CGAGTGTGAA AGCCACGCAG GCCACACCGC CTTCTCGATC TACCTGCCCC TGGAACAAGG AGCCACCGCC TCATGA
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Protein sequence | MTISDAQHRL LLDNLTTATL LLNAELRLEY MNPAAEMLLA VSGQRSHGQF ISELFTESTE ALSSLRQAVE QAHPFTKREA QLTSLTGQTI TVDYAVTPIL HQGQTLLLLE VHPRDRLLRI TKEEAQLSKQ ETTKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEEGLRDY TNVIIEEADR LRNLVDRMLG SNKLPSLAMT NIHEVLERVC SLVDAESQGC ITLVRDYDPS LPDVLIDREQ MIQAVLNIVR NAMQAISSQN ELRLGRITLR SRALRQFTIG HVRHRLVARV EIIDNGPGIP PELQDTLFYP MVSGRPDGTG LGLAITQNII SQHQGLIECE SHAGHTAFSI YLPLEQGATA S
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