| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5096 |
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| Symbol | |
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| ID | 5872911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5692390 |
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| End bp | 5694210 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641550234 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001671316 |
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| Protein GI | 167036085 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAAA ATCTGCGTAA CATCGCCATC ATCGCCCACG TTGACCATGG TAAAACCACC
CTGGTCGACA AACTCCTGCG TCAATCCGGC ACTCTGGAGC GTAACGAGCT CAACGACGAG
CGCGTCATGG ACTCCAACGA CCAGGAAAAA GAGCGCGGTA TTACCATTCT GGCGAAAAAC
ACCGCCATCA ACTGGAACGG CTACCACATC AACATCGTCG ACACCCCCGG CCACGCCGAC
TTCGGTGGCG AGGTTGAGCG TGTAATGTCG ATGGTCGACT CCGTGCTGCT GCTGGTCGAC
GCCCAGGACG GCCCAATGCC GCAAACCCGC TTCGTGACCA AGAAGGCCTT CGAAGCCGGC
CTGAAGCCAA TCGTCGTGAT CAACAAGGTT GACCGTCCGG GCGCACGTCC TGACTGGGTT
CTGGACCAGA TCTTCGACCT GTTCGACAAC CTCGGCGCTA CCGACGAGCA GCTGGACTTC
AAAGTGGTCT ACGCCTCGGC CCTGAACGGC ATTGCCGGTC TGGACCACAC CGAAATGGGC
GAAGACATGA CCGCCCTGTA CCAGTCGATC ATCGACAACG TACCGGCTCC TTCCGTTGAC
CGTGACGGCC CGTTCCAGAT GCAAATCTCG GCACTGGACT ACAACAGCTT CCTCGGCGTT
ATCGGTGTTG GCCGTATCGC CCGTGGTCGC GTCAAGCCGA ACACCCCGGT TGTCGCCATC
GACACCAACG GCAAGAAGCG TAACGGCCGT ATCCTGAAGC TGATGGGTCA CCATGGCCTG
CACCGCATCG ACGTCGAAGA AGCCCAGGCT GGCGACATCG TCTGCATCAG CGGTTTCGAC
GAGCTGTTCA TCTCCGACAC CCTGTGCGCC CCGGACGCGG TAGAAGCGAT GAAGCCGCTG
ACCGTTGACG AGCCAACCGT TTCGATGACC TTCCAGGTCA ACGACTCGCC GTTCTGCGGT
AAAGAAGGCA AGTTCGTCAC CAGCCGTAAC ATCAAGGACC GTCTGGACAA GGAGCTGCTG
TACAACGTTG CTCTGCGCGT TCAGGAAACC GATTCCCCAG ACAAGTTCAA GGTTTCGGGC
CGTGGTGAGC TGCACCTGTC GGTACTGATC GAAACCATGC GTCGTGAAGG CTTCGAGATG
GCTGTGGGCC GTCCTGAAGT GATCATCCGC GAAGTCGACG GCGTCAAGCA GGAACCGTTC
GAGAACGTCA CCATCGACAT CCCTGAAGAA TCCCAGGGCA AGGTGATGGA AGAGATGGGT
CTGCGTAAAG GCGACCTGAC CAACATGGTT CCGGATGGCA AAGGCCGTGT TCGCCTGGAG
TACAACATTC CAGCCCGTGG TCTGATCGGT TTCCGTAACC AGTTCCTGAC CCTGACCAAC
GGTGCAGGCA TCCTGACCTC GATCTTCGAT CGCTACGACA CCATGAAGTC GGGCCAGATG
TCCGGCCGCC TCAACGGCGT ACTGGTTTCG GTCGAGACCG GCAAGGCGCT GACCTACTCG
CTGGAAACCC TGCAGGCACG TGGCAAGCTG TTCGTTGAAC ACGGCCAGGA GATCTACAAC
GGTCAGATCA TCGGCCTGAA CAGCCGCGAT AACGACCTGG GCGTGAACCC GACCAAAGGC
AAGAAGCTCG ACAACATGCG TGCTTCGGGC AAAGACGAAG TCATCGCCCT GGTACCGCCA
GTTCGCCACA CCCTCGAGCA GGCCCTGGAA TTCATCCAGG ACGACGAGCT GTGCGAAGTG
ACGCCGAAGT CGATCCGTCT GCGCAAGAAG ATCCTGGACG AAGGCGAGCG TACCCGCGCT
GCCAAGAAAG CCAAGAACTG A
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| Protein sequence | MIENLRNIAI IAHVDHGKTT LVDKLLRQSG TLERNELNDE RVMDSNDQEK ERGITILAKN
TAINWNGYHI NIVDTPGHAD FGGEVERVMS MVDSVLLLVD AQDGPMPQTR FVTKKAFEAG
LKPIVVINKV DRPGARPDWV LDQIFDLFDN LGATDEQLDF KVVYASALNG IAGLDHTEMG
EDMTALYQSI IDNVPAPSVD RDGPFQMQIS ALDYNSFLGV IGVGRIARGR VKPNTPVVAI
DTNGKKRNGR ILKLMGHHGL HRIDVEEAQA GDIVCISGFD ELFISDTLCA PDAVEAMKPL
TVDEPTVSMT FQVNDSPFCG KEGKFVTSRN IKDRLDKELL YNVALRVQET DSPDKFKVSG
RGELHLSVLI ETMRREGFEM AVGRPEVIIR EVDGVKQEPF ENVTIDIPEE SQGKVMEEMG
LRKGDLTNMV PDGKGRVRLE YNIPARGLIG FRNQFLTLTN GAGILTSIFD RYDTMKSGQM
SGRLNGVLVS VETGKALTYS LETLQARGKL FVEHGQEIYN GQIIGLNSRD NDLGVNPTKG
KKLDNMRASG KDEVIALVPP VRHTLEQALE FIQDDELCEV TPKSIRLRKK ILDEGERTRA
AKKAKN
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