Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5089 |
Symbol | |
ID | 5872904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5685077 |
End bp | 5685673 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550227 |
Product | hypothetical protein |
Protein accession | YP_001671309 |
Protein GI | 167036078 |
COG category | [S] Function unknown |
COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCAC CTTGGCAGCC GTTGCTGGAG TGGTGGTTCG GTTGGGGCAC CAGTGCCCAG GCCGTGGCTG ACGAGAAGAG CACGCTGTGG TTCGGCAAGC ATCATGATGC CGACGCCCAT GCGCTGTTTG GCGACCTGGT CGAGCAGGCC CTGGCGGGCG GGCTCGACGA GTGGCAGCAA AGCCCGCAGG GCTGGCTGGG CCTGCTGATC TTGCTGGACC AGCTGCCGCG CATGATTTAC CGCGACACGC CGCGCGCCTT CGAGGGCGAC CGGCGTGCCC AGGTGGTGGC CATGCAGGGG CTGCAGAAGG GCTGGGACTA TCAACTGTTG CCCATCCAGC GGGTGTTCGT ACTGCTGGTG CTGGAGCATG CCGAGGTGCT GGACTGGCAG AACTTGTGTG TCGAGCGCTA TCAGATGCTG CTGGATGAGC AGCCAGAGGC TACCCGCCGG CTGTTCGAAG GCTTCCTCGA CTATGCCGAG CAGCACCAGC GAGTCATTGC CCGGTTCGGG CGTTTCCCGC ACCGCAACCT GGTGCTGGAG CGACCGAGTA CCAGCGAAGA GATGGACTTT TTGCTGGAGC CTGGTTCCAG GTTCTGA
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Protein sequence | MLAPWQPLLE WWFGWGTSAQ AVADEKSTLW FGKHHDADAH ALFGDLVEQA LAGGLDEWQQ SPQGWLGLLI LLDQLPRMIY RDTPRAFEGD RRAQVVAMQG LQKGWDYQLL PIQRVFVLLV LEHAEVLDWQ NLCVERYQML LDEQPEATRR LFEGFLDYAE QHQRVIARFG RFPHRNLVLE RPSTSEEMDF LLEPGSRF
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