Gene PputGB1_5089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5089 
Symbol 
ID5872904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5685077 
End bp5685673 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID641550227 
Producthypothetical protein 
Protein accessionYP_001671309 
Protein GI167036078 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAC CTTGGCAGCC GTTGCTGGAG TGGTGGTTCG GTTGGGGCAC CAGTGCCCAG 
GCCGTGGCTG ACGAGAAGAG CACGCTGTGG TTCGGCAAGC ATCATGATGC CGACGCCCAT
GCGCTGTTTG GCGACCTGGT CGAGCAGGCC CTGGCGGGCG GGCTCGACGA GTGGCAGCAA
AGCCCGCAGG GCTGGCTGGG CCTGCTGATC TTGCTGGACC AGCTGCCGCG CATGATTTAC
CGCGACACGC CGCGCGCCTT CGAGGGCGAC CGGCGTGCCC AGGTGGTGGC CATGCAGGGG
CTGCAGAAGG GCTGGGACTA TCAACTGTTG CCCATCCAGC GGGTGTTCGT ACTGCTGGTG
CTGGAGCATG CCGAGGTGCT GGACTGGCAG AACTTGTGTG TCGAGCGCTA TCAGATGCTG
CTGGATGAGC AGCCAGAGGC TACCCGCCGG CTGTTCGAAG GCTTCCTCGA CTATGCCGAG
CAGCACCAGC GAGTCATTGC CCGGTTCGGG CGTTTCCCGC ACCGCAACCT GGTGCTGGAG
CGACCGAGTA CCAGCGAAGA GATGGACTTT TTGCTGGAGC CTGGTTCCAG GTTCTGA
 
Protein sequence
MLAPWQPLLE WWFGWGTSAQ AVADEKSTLW FGKHHDADAH ALFGDLVEQA LAGGLDEWQQ 
SPQGWLGLLI LLDQLPRMIY RDTPRAFEGD RRAQVVAMQG LQKGWDYQLL PIQRVFVLLV
LEHAEVLDWQ NLCVERYQML LDEQPEATRR LFEGFLDYAE QHQRVIARFG RFPHRNLVLE
RPSTSEEMDF LLEPGSRF