| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5073 |
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| Symbol | |
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| ID | 5872888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5665760 |
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| End bp | 5666722 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550211 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001671293 |
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| Protein GI | 167036062 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAAC ACAAGAAAGC CCAGTGGCCC TGGCACGGGC TGACCGCCCT GGTCCTGGTG
GGCCTGGCGC TCAGCCTGTA CATGGCCACT TCGATGATTT CCTACGAGTG GCGCTGGAAC
CGCGTACCGC AGTACTTTGC CTACAAGGCC GAGGAAACAC AGCGCGCTGC CAATTACGGC
ACCGTGCAGG AAATCGTCAT CTCCGGCGAT AACGCTCGCG TCACGCTGAA GGACGAGAGC
GGTGCCGAGC AAGTGCTCGA TGTGGCCAAG GACAGCCTGC AGCTGAGCCG TGGCGACGAT
GTCGCCGAAG GCGACCCGAT TGGTGTAACC CGGCATTGGG CAGCGGGCCC GCTGGCCTGG
GGCCTTTGGA CCACCTTGTG GATCTCGGTG GTGTCCGGGG CACTGGGCCT GGTGATCGGC
CTGTTCGCTG GCTTGTGCCG GTTGTCCAAC AACCCCACCC TGCGCGACCT GTCGACCGTT
TATGTCGAAC TGGTGCGCGG CACGCCGCTG CTGGTGCAGA TCTTCATCTT CTACTTCTTC
ATCGGCACTG TGCTCAACCT GTCCCGGGAA TTTGCCGGGG TGGCGGCGCT GGCGCTGTTC
ACTGGCGCCT ACGTGGCCGA AATTGTCCGT GCCGGCGTGC AGTCGATCGC CAAGGGCCAG
AATGAAGCAG CTCGTTCCCT GGGCCTGAAC GCTGGCCAGT CGATGCGCCA CGTCATCTTG
CCGCAGGCGT TCAAACGTGT GCTGCCACCG CTGGCCGGCC AGTTCATCAG CCTGGTCAAG
GACACTTCGC TGGTGTCGGT AATCGCCATC ACCGAGCTGA CCAAGAGTGG CCGTGAGGCT
ATCACCACCT CGTTCTCTAC CTTCGAAATC TGGTTCTGCG TGGCAGGCCT GTACCTGCTG
ATCAACCTGC CGCTGTCGCA CATTGCCAGT CGGCTCGAGC GGAGGCTTGC GCAAAGTGAT
TGA
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| Protein sequence | MIKHKKAQWP WHGLTALVLV GLALSLYMAT SMISYEWRWN RVPQYFAYKA EETQRAANYG
TVQEIVISGD NARVTLKDES GAEQVLDVAK DSLQLSRGDD VAEGDPIGVT RHWAAGPLAW
GLWTTLWISV VSGALGLVIG LFAGLCRLSN NPTLRDLSTV YVELVRGTPL LVQIFIFYFF
IGTVLNLSRE FAGVAALALF TGAYVAEIVR AGVQSIAKGQ NEAARSLGLN AGQSMRHVIL
PQAFKRVLPP LAGQFISLVK DTSLVSVIAI TELTKSGREA ITTSFSTFEI WFCVAGLYLL
INLPLSHIAS RLERRLAQSD
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