Gene PputGB1_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5070 
Symbol 
ID5872885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5660976 
End bp5662892 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content66% 
IMG OID641550208 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001671290 
Protein GI167036059 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAT GGTTAGCCCA ATCGCTGGGC AATGTGAGCG TCAATCGCAA ATTGGGGCTG 
GGCTTCGGCC TGGTGCTGCT GTTGACCTTG GCCATTACCC TGGCCGGCTG GCACGGCATG
GACAGCATCA TCGACCGTGG CGACAAGCTG GGTAACATCT CGGTCATCCA GCAGTACACC
CAGGAACTGC GCATTGCCCG CCAGCATTAC GAGCGCCGCA GTGATGATGC GTCGGTGGCC
GAGCTGGAAA AAGCCCTGGC CAACCTCGAC CGCCAGGTGC AGCTGATGCT CGGGCAGATC
GAACACCCCG CCGACCGCCA GCGCCTGGAG CAGCAGCGTG AGGCTGTGCG CATCTACCAG
CAGGCATTCA ACGAGCTGAA GCAGGCCGGC CAGCGCCGCG AGGCCAGCCG TAGTGTGCTT
GGCGACAGCG CCGACAAGGC CGCAGAGCTG ATCGGCCGCG TGCAGCGGGG CCTGCTGCAA
GGTGGCGATA TCAACCAGTA CCAGCACGCT GTGGAGGTGA GCGCCCTGCT CCAGCAAGCC
CGCTTCCAGG TGCGTGGCTA CACCTACAGC GGCAATGCCG AGTTCCAGCA AACGGCGCTG
AAGGCCATCG ACCAGGCCCT GGCCGAGCTG CGCGCATTGC CGGCCAAAGT GTCGGCCGAA
CATGCCGCCG GCCTCGACGA TGCTGCCACT GCCATGGGCG GCTACCGCGA TGCGGTCACC
CAGTTCGGCA ATGCCCAGGC CGCCAGCGAG CAGGCCCTGC AGCACATGGC CGAGCAAGGT
ACGCTGCTGC TGCAGACCAG CCAGGCGATG ACCACATCGC AGACCGAGGT ACGTGACGCA
GGCGCAGCCC AGGCCAAGAC CCTGCTCGCC GTGGCCACGG TGCTGGCCCT AGCCCTCGGC
CTGCTGGCCG CCTGGGCCAT TACCCGGCAG ATCATCATCC CCCTGCGCCA AACCTTGCGC
GCCGCCGAGC GCGTGGCCAG TGGCGACCTG ACCCAGAACC TGCAAGTGCA ACGTCGCGAC
GAACTGGGCC AGTTGCAGGC CAGCATGCAG CGCATGACCC AAGGCTTGCG GGAACTGATC
GGCGGCATTG GCGACGGCGT CACGCAGATC GCCAGCGCTG CCGAGCAACT GTCGGCCGTC
ACCGAGCAGA CCAGCGCCGG GGTCAACAAC CAGAAGGTCG AAACCGACCA AGTGGCGACT
GCCATGAACC AGATGACGGC CACCGTGCAC GAAGTAGCGC GCAATGCCGA ACAGGCCTCG
GAAGCCGCCT TGATGGCCGA CCAGCAGGCC CGTGAAGGCG ACCGGGTGGT GGGCGAAGCG
GTGGCGCAGA TCGAGCGCCT GGCGGGCGAA GTGATCAACT CCAGCGAAGC GATGAACCAG
CTCAAGGCCG AAAGCGACAA AATCGGCAGC GTGCTCGACG TGATCAAGTC GGTGGCCCAG
CAAACCAACC TGCTGGCCCT CAACGCGGCG ATCGAAGCCG CCCGCGCCGG TGAGGCCGGG
CGTGGCTTTG CCGTGGTGGC CGACGAAGTG CGCAGCCTGG CCCAACGCAC CCAGCAGTCG
ACTGAAGAGA TCGAAGAGCT GATTGCCGGC CTGCAAAGCG GCACCCAACG GGTGGCCAGC
GTGATGGACA ACAGCCGCCA ACTGACCGAC AGCAGCGTCG AGCTGACCCG CCGCGCCGGC
AGCTCGCTGG AAACCATCAC CCGTACCGTG TCGTCGATTC AGGCGATGAA CCAGCAGATT
GCCACGGCGG CAGAGGAACA GACAGCCGTG GCCGAGGAGA TCAACCGCAG CGTGATGAAT
GTGCGGGATA TTTCTGACCA GACCTCGGCG GCCAGCGAAG AGACGGCCAG CTCCAGCGTT
GAGCTGGCGC GGCTGGGGAC CCACCTGCAG GGGTTGGTGG GGCGGTTCAA GCTCTGA
 
Protein sequence
MYQWLAQSLG NVSVNRKLGL GFGLVLLLTL AITLAGWHGM DSIIDRGDKL GNISVIQQYT 
QELRIARQHY ERRSDDASVA ELEKALANLD RQVQLMLGQI EHPADRQRLE QQREAVRIYQ
QAFNELKQAG QRREASRSVL GDSADKAAEL IGRVQRGLLQ GGDINQYQHA VEVSALLQQA
RFQVRGYTYS GNAEFQQTAL KAIDQALAEL RALPAKVSAE HAAGLDDAAT AMGGYRDAVT
QFGNAQAASE QALQHMAEQG TLLLQTSQAM TTSQTEVRDA GAAQAKTLLA VATVLALALG
LLAAWAITRQ IIIPLRQTLR AAERVASGDL TQNLQVQRRD ELGQLQASMQ RMTQGLRELI
GGIGDGVTQI ASAAEQLSAV TEQTSAGVNN QKVETDQVAT AMNQMTATVH EVARNAEQAS
EAALMADQQA REGDRVVGEA VAQIERLAGE VINSSEAMNQ LKAESDKIGS VLDVIKSVAQ
QTNLLALNAA IEAARAGEAG RGFAVVADEV RSLAQRTQQS TEEIEELIAG LQSGTQRVAS
VMDNSRQLTD SSVELTRRAG SSLETITRTV SSIQAMNQQI ATAAEEQTAV AEEINRSVMN
VRDISDQTSA ASEETASSSV ELARLGTHLQ GLVGRFKL