| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5048 |
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| Symbol | pyrB |
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| ID | 5872863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5638104 |
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| End bp | 5639108 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550186 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001671268 |
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| Protein GI | 167036037 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.173326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAA TCGACGCCAA GCGCCCGCTG CAGCTCAATG ATCAGGGCCA GCTGCGCCAC
TTCCTCTCGC TCGACGGTTT GCCCCGCGAA CTGCTCACCG AGATTCTCGA CACCGCCGAC
TCCTTCCTGG AAGTCGGTGC CCGGGCCGTG AAAAAAGTCC CGCTGCTGCG CGGCAAGACC
GTATGCAACG TGTTCTTCGA GAACTCGACC CGTACCCGTA CCACCTTCGA ACTGGCGGCC
CAGCGCCTGT CGGCCGACGT GATCAGCCTG AACGTGTCGA CCTCCTCGAC CAGCAAGGGC
GAAACGCTGT TCGACACCCT GCGCAACCTT GAAGCCATGG CGGCCGATAT GTTCGTCGTG
CGCCACTCCG ACTCGGGCGC CGCGCACTTC ATCGCCGAAC ATGTGTGCCC GGACGTTGCC
GTGATCAACG GCGGTGACGG CCGCCACGCG CACCCGACCC AGGGCATGCT CGACATGCTC
ACCATCCGCC GCCACAAGGG CAGCTTCGAA AACCTGTCGG TGGCCATCGT CGGTGACATC
CTGCATTCGC GCGTGGCCCG CTCCGACATG CTCGCGCTCA AAGCGCTGGG TTGCCCGGAC
ATTCGCGTGA TCGGCCCGAA AACCCTGATC CCGATCGGTA TCGAGCAGTA CGGCGTAAAG
GTCTACACCG ACCTCGCCGA AGGCCTGAAA GACGTCGACG TGGTGATCAT GCTGCGTCTG
CAGCGTGAGC GCATGGCCGG TGGCCTGCTA CCCAGCGAAG GCGAGTTCTA CCGCCTGTTC
GGCCTGACCA CCGCACGCCT GGCCGGGGCC AAGCCCGACG CCATCGTCAT GCACCCAGGC
CCGATCAACC GAGGTGTCGA AATCGAGTCT GCAGTGGCCG ACGGCAAGCA CTCGGTGATC
CTCAACCAGG TCACCTACGG CATCGCCGTG CGCATGGCCG TGTTGTCCAT GGCCATGAGC
GGGCAGAACG CGCAACGTCA ATTCGACCAG GAGAACGCCC AGTGA
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| Protein sequence | MTPIDAKRPL QLNDQGQLRH FLSLDGLPRE LLTEILDTAD SFLEVGARAV KKVPLLRGKT
VCNVFFENST RTRTTFELAA QRLSADVISL NVSTSSTSKG ETLFDTLRNL EAMAADMFVV
RHSDSGAAHF IAEHVCPDVA VINGGDGRHA HPTQGMLDML TIRRHKGSFE NLSVAIVGDI
LHSRVARSDM LALKALGCPD IRVIGPKTLI PIGIEQYGVK VYTDLAEGLK DVDVVIMLRL
QRERMAGGLL PSEGEFYRLF GLTTARLAGA KPDAIVMHPG PINRGVEIES AVADGKHSVI
LNQVTYGIAV RMAVLSMAMS GQNAQRQFDQ ENAQ
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