Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5032 |
Symbol | |
ID | 5872847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5619776 |
End bp | 5621626 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550170 |
Product | amine oxidase |
Protein accession | YP_001671252 |
Protein GI | 167036021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTG CTTGGGTGCG CCTGTGCGCG TTGGTATTGA TTGGTGTGTC CAGCGGCGCC GCGCTGGCAA AGGACAAGAC GCCCACGGCA ATTGTCGTAG GTGGCGGCCT GGCAGGCCTG ACGGCCGCCT ACGAGTTGCA GAACAAAGGC TGGCAGGTGA CGCTGCTGGA GGCCAAGGCG GGCATGGGCG GGCGTTCTGG CCTGGCAACC AGCGAGTGGA TCGGCAATGC CAAGGCGCAG CCGGTGCTGA ACCAGTACCT GGACCGTTTC AAGCTTGAAA CACTGCCAGC GCCGGAGTTC GTGCGTACCC CCGGTTACCT GATCGACGGC GAGTACTTCA GTGCCACCGA CCTGGCCACC AAGCAGCCGG CTACCGCCGA GGCGCTCAAG CGTTACGAGA AAACCCTCGA CGACCTGGCC CGTTCGATCG ACGACCCGCT GAACCCGCAA GCAAACAGCA CGTTGTTCGC CCTCGACCAG ATCAACGTCT CCACCTGGCT GGACAAACTG CAACTGCCGA CCACCGCCCG CCAGCTGGTC AACCAGCAGA TCCGTACGCG CTACGATGAA CCGTCGCGCC TGTCGTTGCT GTACTTCGCC CAGCAGAACC GCGTGTACCG CGGCGTCAGC GACCGCGACC TGCGCGCCGC GCGGCTGCCC GGTGGCAGCC CGGTGCTGGC CCAGGCCTTC GTCAAGCAAT TGAAAACCAT CAAGACCAGC TCGCCGGTCA CCGCCATTGT CCAGGACAAG GACGGCGTCA CGGTAAAAGT CGGCAGCGTC GGCTACCAGG CGGATTACCT GGTAATGGCC GTGCCGCTGC GCGCCCTGGC CAAAATCCAG ATGACCCCAG GCCTGGACAG CCAGCACCTG GCCGCGCTCA AGGGTACCAA CTATGGCTGG CGCGACCAGC TGATGCTCAA GTTCAAGAAG CCGGTATGGG AAAGCCGCGC GCGCATGTCG GGCGAAATCT TCAGTAACGC CGGCCTTGGC ATGCTGTGGA TCGAGCCGGC GCTCAAGGGC GGCGCCAACG TGGTCATCAA CCTGTCCGGC GACAACGCCC GCCTGCTGCA GGCGTTTGGC GACAAGCAGA TGGTCGACCA GGTGCTGATA CGCCTGCATG CCTTCTACCC GCAGGCCCGT GGTGCCTTCA CCGGTTATGA GGTCAAGCGC TACAGCACCG ACGCCGGTAC CGGCGGCGCC TATCTGGCCT ATGGCCCAGG GCAGATCAGC AAGTACTGGC GCCTGTGGGA GCGCCCTGTG CAGCGCATCA CTTTTGCTGG CGAGCACACC GACGCCCTGT ATCCAGGCAC CCTGGAAGGC GCCCTGCGCA GCGGCCAGCG TGCGGCCAGC CAGGCCCAGG ATCTGCTGGC CGGCAAGTCG TTTGACCCTG CCAAGGCGGC ACCGGTCGCA GCGGCGGCGG CGGGTTCGGC GGCCGCCAAG GCGAGCAAGG GTGGGTTCTT CTCGAACATG TTTGGTGGTT CGTCTGACAA GGCTGACAAG CCTGACGCGG CGCCTGCCAA AGCTGAGTCG AAGCCTGTCG ATGAGGCCAA GCAGGACAAA CCTGGCTTCT TCAAGCGTCT GTTTGGTGGG GCGGACACGC CCGAGGTGAA GGCAGAACCG ATTGCCAAGG CTGAAGCAGT GGCGCCAGCC CCAGCGCCTG CTCCCCAAAC CGCGCCCGCC CCGGTCGCGC CTGCACCTGC AGTGAAGGAA GCGGCTGCCA AGCCTGCGGC CACCAAGGCG GCACCGGCCA AGCATGCGCC GACGCACAAA CCTGTTGAGG CCAAGAAAGC GACAGCCAAG TCCGAGCCTG CGAAGAAGGC TGTGGCCAAT ACCCAGGCCA AGGCTGGCTG A
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Protein sequence | MAAAWVRLCA LVLIGVSSGA ALAKDKTPTA IVVGGGLAGL TAAYELQNKG WQVTLLEAKA GMGGRSGLAT SEWIGNAKAQ PVLNQYLDRF KLETLPAPEF VRTPGYLIDG EYFSATDLAT KQPATAEALK RYEKTLDDLA RSIDDPLNPQ ANSTLFALDQ INVSTWLDKL QLPTTARQLV NQQIRTRYDE PSRLSLLYFA QQNRVYRGVS DRDLRAARLP GGSPVLAQAF VKQLKTIKTS SPVTAIVQDK DGVTVKVGSV GYQADYLVMA VPLRALAKIQ MTPGLDSQHL AALKGTNYGW RDQLMLKFKK PVWESRARMS GEIFSNAGLG MLWIEPALKG GANVVINLSG DNARLLQAFG DKQMVDQVLI RLHAFYPQAR GAFTGYEVKR YSTDAGTGGA YLAYGPGQIS KYWRLWERPV QRITFAGEHT DALYPGTLEG ALRSGQRAAS QAQDLLAGKS FDPAKAAPVA AAAAGSAAAK ASKGGFFSNM FGGSSDKADK PDAAPAKAES KPVDEAKQDK PGFFKRLFGG ADTPEVKAEP IAKAEAVAPA PAPAPQTAPA PVAPAPAVKE AAAKPAATKA APAKHAPTHK PVEAKKATAK SEPAKKAVAN TQAKAG
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