| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5023 |
|---|
| Symbol | |
|---|
| ID | 5872838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5609875 |
|---|
| End bp | 5611110 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641550161 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001671243 |
|---|
| Protein GI | 167036012 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAT TAGTTGCCGC GTTTATCTGC CTCACCACCC TCCTTACCTA CGTCAATTAC
CGCTTCATCG GCCTGCCACC CGCCATCGGC GTGATGGTCA CGGCACTGCT GTTCTCCCTG
ATGCTGCAGG GCCTTAGCCT GATCGGCTTC CCTGGCCTGG AAGAACGTGT CGAAGGCTTG
ATGAACCAAA TCGATTTCAA CGACCTGCTG ATGCACTGGA TGTTGGCCTT CCTGCTGTTT
GCCGGTGCAT TGCACGTCAA CCTCAGCGAC CTGCGCAGCT ACCGCTGGCC CATTGGCCTG
CTGGCCACCT TGGGCGTGCT GATCGCTACC GTAGTCATTG GCTACCTGTC GCACTGGGTA
TTCGCCCTGT TCGGCTGGCA GGTACCGCTG ATCTACTGCC TGCTGTTCGG TGCGCTGATC
TCGCCCACCG ACCCGATTGC CGTACTGGGC GCGCTGCGTA CCGCCAATGC GTCCAAACCG
CTGAAAACCA CCATCGTTGG CGAATCGCTG TTCAACGACG GCACGGCGGT CGTGGTGTTC
ACCGTGTTGC TGGGCATCAT CCAGCTGGGT GAAACGCCAA GCCTGACCGA CACGGCGATC
CTGTTCGCCC GCGAGGCCAT TGGCGGCGTG GTATTCGGCG GCCTGATCGG CTATGCCACG
TACCGCATGA TCAAGAGCAT CGAGCAGTAC CAGGTGGAGG TCATGCTGAC CCTGGCACTG
GTTATCGGTG GCTCGGCGAT GTGCTACGAG CTGCACGTGT CGGCACCGAT CGCCATGGTG
GTGGCCGGCC TGATCATCGG TAACCTGGGG CGAAACCTGG CGATGAATGA CATGACGCGC
CGCTACATGG ACGGTTTCTG GGAGCTGATC GATGACATGC TCAATGCCTT GCTGTTCGCC
TTGATCGGCC TGGAGCTGTT GCTGCTGCCG TTCAACTGGA TGCACCTGGC GGCCGGCGGC
GTGCTGGCGC TGGCGGTGCT GCTGTCGCGG TTGCTGACCG TGGCCCCGGC GATCGTGCTG
CTGCGCCGCT GGCGCCCTGT GCCCAAGGGC ACGGTACGGG TGCTGACTTG GGGCGGCCTG
CGCGGCGGGG TGTCGGTGGC CCTGGCACTG TCGCTGCCGT TGGGCGAGGA GCGTGACCTG
CTGCTGTCGA TCACCTACAT CGTGGTGTTG TCTTCGATTC TGGTGCAGGG TTTGAGCATC
GGGCGGGTGG TGCGCAAGGT CAGCGCCCAG CCGTGA
|
|---|
| Protein sequence | MLELVAAFIC LTTLLTYVNY RFIGLPPAIG VMVTALLFSL MLQGLSLIGF PGLEERVEGL
MNQIDFNDLL MHWMLAFLLF AGALHVNLSD LRSYRWPIGL LATLGVLIAT VVIGYLSHWV
FALFGWQVPL IYCLLFGALI SPTDPIAVLG ALRTANASKP LKTTIVGESL FNDGTAVVVF
TVLLGIIQLG ETPSLTDTAI LFAREAIGGV VFGGLIGYAT YRMIKSIEQY QVEVMLTLAL
VIGGSAMCYE LHVSAPIAMV VAGLIIGNLG RNLAMNDMTR RYMDGFWELI DDMLNALLFA
LIGLELLLLP FNWMHLAAGG VLALAVLLSR LLTVAPAIVL LRRWRPVPKG TVRVLTWGGL
RGGVSVALAL SLPLGEERDL LLSITYIVVL SSILVQGLSI GRVVRKVSAQ P
|
|---|
| |