Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4956 |
Symbol | |
ID | 5872771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5528995 |
End bp | 5529474 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641550094 |
Product | hypothetical protein |
Protein accession | YP_001671176 |
Protein GI | 167035945 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.564772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTTC TTATCAGCTA CCGCCACGAA GTGCGGCTCG ACGCCTTTAT TCTCAACGAG CGCCTGCTGC TCGAAGGCAT CCCCACCCAA GTGGTGCAGT TGGACTGCGA CGGGCAAACC CATGACGACC TGTATGGCAG TTTCTGCCAG CAGATGAACG ATGCCACCCA CTGGATCGGA GTATTGCCGA CCGATACCAA CGACGCCTGG TGGACCGCCT GGCTGCTGGG GGCGGCAGCG ATTACCTGCC GGCGAGTGAG TTTCTTCCGC AAAGGTTCAG GCGCACTGCC GGTTTGCCTG AGCAAATGGC CGGCCATGCG CGAACGTACG CATATCGACC TGTTCGTGCG GGCTTATCAT GACGAACGCA TGTTCGAGCG AGCCATGACA CTGCCGCCGG GGCGCGGCTC TTGCACTGAC AGGGATAATG CAGCCTTCTT TCATGCTGAT CTCAAGGCCA AGATCAGGCG GGGGTTCTGA
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Protein sequence | MPVLISYRHE VRLDAFILNE RLLLEGIPTQ VVQLDCDGQT HDDLYGSFCQ QMNDATHWIG VLPTDTNDAW WTAWLLGAAA ITCRRVSFFR KGSGALPVCL SKWPAMRERT HIDLFVRAYH DERMFERAMT LPPGRGSCTD RDNAAFFHAD LKAKIRRGF
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