| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4923 |
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| Symbol | |
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| ID | 5872736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5490858 |
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| End bp | 5491994 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550059 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001671143 |
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| Protein GI | 167035912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000164326 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGA CGTTTTACAA GAAAGGTTTC CTGGCTCTGG CCGTAGCTAC GGCACTGGGT
GTTTCTTCGT ATGTTCAGGC CGACGTCAAG ATCGGTGTAG CGGGCCCCAT GACCGGGGCA
AACGCAGCGT TTGGCGAGCA GTACATGAAA GGTGCGCAGG CAGCGGCCGA CAAGATCAAC
GCCGCCGGTG GCGTGAACGG CGAGAAAATC GTCCTGGTCA AAGGCGATGA CGCCTGTGAA
CCGAAGCAGG CCGTGGCCGT GGCCAACCGC CTGGTGGATC AGGACAAGGT GATCGGCGTG
GTCGGCCACT TCTGTTCCTC CAACACCATC CCGGCGTCCG AGGTGTATGA CGAGGCGGGT
GTCATCGCCA TTACTCCGGG CTCCACCAAC CCACAGGTTA CCGAGCGCGG CCTGAGCGCC
ATGTTCCGCA TGTGCGGCCG TGACGACCAG CAGGGTATCG TCGCTGGCGA CTACATCGTC
GACGTGCTCA AGGGCAAGAA AGTCGCGGTA CTGCACGACA AGGACACCTA TGGCCAGGGC
CTGGCGGACG CGACCAAGGC GCAGCTGGAA AAACGCGGCG TGAAGCCAGT GTTGTACGAA
GGCCTGACCC GTGGCGAGAA AGACTTCAGC GCCGTGGTGA CCAAGATCCG CTCCACCGGC
GCCGACGTTG TCTACTTCGG TGGTCTGCAC CCGGAAGCCG GCCCGCTGGT ACGCCAGCTG
CGCGAGCAGG GCCTGAAGGA CGTCAAGTTC ATGTCCGATG ACGGCATCGT CACCGACGAA
CTGGTGTCCA CCGCTGGCGG TGCGCAGTAC GTCGATGGCG TGTACATGAC CTTCGGTGCC
GACCCGCGCC TGCTGCCAGA CAGCAAGGCG GTGGTGGAGG AGTTCCGTAA GGCCGGTACC
GAACCTGAAG GCTACACCCT GTACGCCTAT GCCTCGCTGC AGGCCCTGGC CGCCGCGTTC
AATGGCGCCA AGTCGAACAA AGGCGAAGAC GCTGCCAAGT GGCTCAAGGC CAACCCGGTG
CAGACCGTCA TGGGCGAGAA AAAGTGGGAC AGCAAAGGTG ACCTGACCGT CTCCGACTAT
GTGGTCTACC AGTGGGACAA AGACGGTAAA TACCACCAGC TGGAAAAACA AAAATAA
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| Protein sequence | MSQTFYKKGF LALAVATALG VSSYVQADVK IGVAGPMTGA NAAFGEQYMK GAQAAADKIN
AAGGVNGEKI VLVKGDDACE PKQAVAVANR LVDQDKVIGV VGHFCSSNTI PASEVYDEAG
VIAITPGSTN PQVTERGLSA MFRMCGRDDQ QGIVAGDYIV DVLKGKKVAV LHDKDTYGQG
LADATKAQLE KRGVKPVLYE GLTRGEKDFS AVVTKIRSTG ADVVYFGGLH PEAGPLVRQL
REQGLKDVKF MSDDGIVTDE LVSTAGGAQY VDGVYMTFGA DPRLLPDSKA VVEEFRKAGT
EPEGYTLYAY ASLQALAAAF NGAKSNKGED AAKWLKANPV QTVMGEKKWD SKGDLTVSDY
VVYQWDKDGK YHQLEKQK
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